Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02128 ATGAGACTGCTCAAGTTGATCTACCTGACTATTCTACTTATCCTATCAACTTTTCGGGAGGCTAGCTCACATGGTGATCAACCTCTCTCCAAAATTGCTATTCAAAAAACCACTCTTGCTTTTCATGAACAGGCTTATGTTAAAGCCTCTCCAGCTATTCTTGGATTTAAGGGGCAAACAACCGAATGGGTGAGTTTGGAGTATAGTTCTCCAAAGCATTCAATCGATGATTGGATTGGCGTCTTTTCTCCTGCCAACTTCAGTTCTTCGACCTGCACTGCTGAAAACCCAAGAGCATATCCACCCTTCGTGTGTTCTGCTCCTATAAAGTTTCAATATGCAAATTACTCCAACCCAGATTACAAAAACACAGGAAAAGGGTATTTGAAGCTTCAGCTGATAAACCAGAGATCAGATTTCTCTTTTGCATTATTTTCTGGTGGTTTAACAAATCCAAAGCTGGTTGCTGTATCAAATCAAGTAGCATTTATGAATCCCAATGCTCCTCTTTACCCACGTTTAGCACAAGGAAAAACATGGAATGAAATGACTGTAACATGGACAAGCGGATATGGCATTGATGAAGCAGAACCTTTTGTTGAATGGAACCTGAAAGGAGAGACTTTCACGCGCTCTCCTGCTGGGACTCTGACTTTCGATCGTAGTAGCATGTGTGGTGCACCAGCAAAAACAGTAGGATGGCGTGATCCTGGATATATACACACTGGTTTTCTTAAGGATTTGTGGCCCAACAGACTTTATACATACAAACTAGGACACAGATTGTACAATGGTACATATATTTGGAGTTCAACATATCAATTTAAGGCCTCCCCATATCCTGGTCAAAAATCCTTGCAACGAGTCATCATTTTCGGCGACATGGGAAAGGATGAAGCTGATGGTTCCAATGAATATAATGATTTTCAGCAAGGTTCTCTTAATACTACCAGACAGCTCATTAGGGATTTGAAAAACTACGACATTGTTTTCCATATTGGAGATTTAAGTTATGCGAGTGGATACCTTTCTCAATGGGACCAATTTCTTGCACAAATTGAACCAATTGCTTCAACAGTACCGTACATGGTTGCTAGTGGTAATCATGAACGTGACTGGCCCAATTCAGGATCCTTCTATAACACCATGGATTCGGGTGGAGAGTGTGGAGTAGTTGCTGAAAGTATGTTCTATGTTCCGGCTGAAAACCGAGCAAAGTTCTGGTACTCCACTGACTATGGGATGTTCCGTTTCTGCGTTGCTGACACAGAACATGACTGGAGGGAGGGAACGGAGCAGTATAAGTTCATCGAACACTGCCTAGCTTCAGTCGATAGAAGAAAGCAACCATGGCTCATTTTTATGGCTCATCGGGTACTGGGCTACTCTTCTGGTATTTTTTATGCTCAAGAGGGATCATTTGCTGAACCAATGGGGAGAGAGAGTCTTCAAAATCTTTGGCAGAAATATCGGGTCGATCTCGCCTTTTATGGTCATGTGCACAATTACGAGAGGACATGTCCCATATACCAGAATATTTGCACGAATGAGGAGAAACATCATTACAAAGGTGCCTTGAATGGAACAATACATGTAGTAGTGGGTGGCGGGGGAGCCGGACTCACGGAATTTACCACCCTCAAAACAAAATGGAGTATTTCCAAGGACTATGACTTTGGATATGTTAAGCTTACAGCCTTCGATCATTCAAATCTTTTATTCGAGTATCAGAAGAGTAGCGATGGAAAAGTTTACGATTCATTCAAAATTTCTCGTGATTACCGTGACATTTTGGCCTGCACGGTCGACAGTTGTTCAAGCACGACACTTGCATCTTGA 1839 42.09 MRLLKLIYLTILLILSTFREASSHGDQPLSKIAIQKTTLAFHEQAYVKASPAILGFKGQTTEWVSLEYSSPKHSIDDWIGVFSPANFSSSTCTAENPRAYPPFVCSAPIKFQYANYSNPDYKNTGKGYLKLQLINQRSDFSFALFSGGLTNPKLVAVSNQVAFMNPNAPLYPRLAQGKTWNEMTVTWTSGYGIDEAEPFVEWNLKGETFTRSPAGTLTFDRSSMCGAPAKTVGWRDPGYIHTGFLKDLWPNRLYTYKLGHRLYNGTYIWSSTYQFKASPYPGQKSLQRVIIFGDMGKDEADGSNEYNDFQQGSLNTTRQLIRDLKNYDIVFHIGDLSYASGYLSQWDQFLAQIEPIASTVPYMVASGNHERDWPNSGSFYNTMDSGGECGVVAESMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRRKQPWLIFMAHRVLGYSSGIFYAQEGSFAEPMGRESLQNLWQKYRVDLAFYGHVHNYERTCPIYQNICTNEEKHHYKGALNGTIHVVVGGGGAGLTEFTTLKTKWSISKDYDFGYVKLTAFDHSNLLFEYQKSSDGKVYDSFKISRDYRDILACTVDSCSSTTLAS 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57278439 57283694 - Bda004459.1 Bda01g02128 2128

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02128 612 PANTHER PURPLE ACID PHOSPHATASE-RELATED 1 611 - -
Bda01g02128 612 SUPERFAMILY Purple acid phosphatase, N-terminal domain 147 279 IPR008963 GO:0003993|GO:0046872
Bda01g02128 612 CDD MPP_PAPs 287 592 IPR041792 -
Bda01g02128 612 Pfam Fn3-like domain from Purple Acid Phosphatase 47 165 IPR040974 -
Bda01g02128 612 Pfam Calcineurin-like phosphoesterase 288 503 IPR004843 GO:0016787
Bda01g02128 612 Pfam Purple acid Phosphatase, N-terminal domain 173 276 IPR015914 GO:0003993|GO:0046872
Bda01g02128 612 Gene3D - 283 596 IPR029052 -
Bda01g02128 612 Gene3D - 168 281 - -
Bda01g02128 612 PANTHER PURPLE ACID PHOSPHATASE 1 611 - -
Bda01g02128 612 Pfam Iron/zinc purple acid phosphatase-like protein C 528 587 IPR025733 -
Bda01g02128 612 SUPERFAMILY Metallo-dependent phosphatases 287 594 IPR029052 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02128 K22390 ACP7; acid phosphatase type 7 - pvy:116132270 1085.86
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02128 Bda-Chr1:57278439 Bda15g00672 Bda-Chr15:10179490 0 dispersed
Bda01g02128 Bda-Chr1:57278439 Bda14g01365 Bda-Chr14:16018082 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g38 Blo01g00453 . Bda01g02128 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0528 Cone9ag0540 . . . . . . . . . Bpe02g02315 Bma01g00122 . . . . . . . . . Cpe07g00088 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007198 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 4 1 37