Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02130 ATGAGAAGCCCTTGGCTCAATAAGCTTTCCTTCATATTTGGGCATAGACTGCCACTCAATTGCTTGCTCTTGTGCATCCTTAGCGTGTTTGCAGTCATAGCAATCTTCGGATCCCGCTCAAATGTCTTCGACTTTGCTACTCCTACTCCGGTATCTGTGATTTATGGCAACTACAGAAGGTTGAAGGAGAAAGCTGCTGTTGATTATTTGGATCTGAAGTTTATTTCATCAATTTCTTCTAGTCAAAGGGAGCTTAGCCTTTGTGGCAAAGAAAGAGAAAACTACGTGCCTTGTTACAATGTTTCGGCAAATTCGTTTGCTGGATTTAAAGACGGGGAAGAGTTTGATAGACACTGCAAAGTTTTGAGACAAGAAAAGCACTGTCTAGTTCGTCCTCCGAAAGATTATAAGATCCCCCTCAGATGGCCAGCTGGTAGGGATGTGATATGGAGTGGGAATGTGAAGATAAGCAAAGATCAATTTCTTTCATCAGGAAGCATGACCAAAAGGTTGATGCTGTTAGAAGAGAACCAAATTTCTTTTCACTCTGAGGATGGATTGGTTTTTGATGGCGTCAAAGATTACTCTCGGCAGGTTGCCGAAATGATAGGACTGGGCAGTGACTCTGAATTCCCTCAAGCTGGTGTGCGGACAGTTTTGGATATAGATTGTGGGTTTGGTAGCTTTGGAGCTCATTTATTATCACTGAGTGTGATGGCTATTTGTATTGCCAAATACGAAGCAACTGGTAGCCAAGTTCAGTTGGCCCTTGAGAGAGGTCTTCCGGCATTGATTGGCAGCTTCGTTTCGAGGCAACTTCCATATCCATCGTTGTCTTTCGACATGGTTCACTGCGCACAATGTGGTATTGGTTGGGACGATAAAGGTGGGATGTTCCTTATCGAAGTCGATCGGATACTTAAACCCGGGGGATACTTTGTTTTAACGTCACCGACTAGCAAGCCACAAGGAAGTTTGTCGAATGTGAAGACAAGCATGATCACAGTAGTGGAGGAGTTGGCTAAGGGAGTCTGTTGGAGACTTCAAGGTCAGCAGGATGAAACATTTATATGGCAGAAAGTAGCCGATACTCATTGCTATGCTTCTCGCAAACATGGGGCTGTACCTCTTTGTAAAGAAGACCATGACGTCCAAAATTACTATCAGCCTCTAGCACCATGTATAAGTGGAACCACCAGCAAAAGGTGGATTCCAGTACAGAACAGGTCCTCTTACTCCCATTTGACTGCAGCTGATCTTGAAACTTGTATTCAGCCTGAAGACTTCTTCGAAGACGCACAATTTTGGCGATCTTCCTTGAAAGATTACTGGTCCTTGCTTACACCACTAATTTTCTCCGACCATCCAAAGAGGCTTGGGGATGAAGATCCACTGCCGCCATACAATATGATACATAATGTGATGGACATGAATGCAAACTATGGAGGATTAAATGCTGCATTTGTCGAGGAGAAGAAATCGGCATGGGTGATGAATGTTGTCCCTTTCGGATCTCCTAATACACTCTCTGTCATACTCGATCAAGGTTTAGCCGGCGTACTCCATGATTGGTGCGAACCTTTTCCGACTTACCCACGGACGTATGACATGGTTCATGCGAATGAGCTTTTCTCACATTTCACTTCAGAAAGGTGTAGTATGATGGACTTGATCGTGGAGATAGATCGAATACTACGACCCGAGGGATGGGTTATTCTCAGTGATAAAGTAGAAGTCATCGAGATGGCACGAATGCTCGCAATGAAAATGCGATGGGAGGCCCGGGTGATTGATCCTCAGAACGGCAGTGACCAGAGGCTTCTCATTTGCCAAAAACCTTTCCTCAAAAAATGA 1854 44.39 MRSPWLNKLSFIFGHRLPLNCLLLCILSVFAVIAIFGSRSNVFDFATPTPVSVIYGNYRRLKEKAAVDYLDLKFISSISSSQRELSLCGKERENYVPCYNVSANSFAGFKDGEEFDRHCKVLRQEKHCLVRPPKDYKIPLRWPAGRDVIWSGNVKISKDQFLSSGSMTKRLMLLEENQISFHSEDGLVFDGVKDYSRQVAEMIGLGSDSEFPQAGVRTVLDIDCGFGSFGAHLLSLSVMAICIAKYEATGSQVQLALERGLPALIGSFVSRQLPYPSLSFDMVHCAQCGIGWDDKGGMFLIEVDRILKPGGYFVLTSPTSKPQGSLSNVKTSMITVVEELAKGVCWRLQGQQDETFIWQKVADTHCYASRKHGAVPLCKEDHDVQNYYQPLAPCISGTTSKRWIPVQNRSSYSHLTAADLETCIQPEDFFEDAQFWRSSLKDYWSLLTPLIFSDHPKRLGDEDPLPPYNMIHNVMDMNANYGGLNAAFVEEKKSAWVMNVVPFGSPNTLSVILDQGLAGVLHDWCEPFPTYPRTYDMVHANELFSHFTSERCSMMDLIVEIDRILRPEGWVILSDKVEVIEMARMLAMKMRWEARVIDPQNGSDQRLLICQKPFLKK 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57297671 57301150 - Bda004461.1 Bda01g02130 2130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02130 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 336 IPR029063 -
Bda01g02130 617 Gene3D Vaccinia Virus protein VP39 187 362 IPR029063 -
Bda01g02130 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 469 591 IPR029063 -
Bda01g02130 617 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 612 IPR004159 GO:0008168
Bda01g02130 617 CDD AdoMet_MTases 218 316 - -
Bda01g02130 617 Gene3D Vaccinia Virus protein VP39 512 600 IPR029063 -
Bda01g02130 617 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 616 IPR004159 GO:0008168
Bda01g02130 617 PANTHER METHYLTRANSFERASE PMT4-RELATED 1 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00888 Bda-Chr1:41866787 Bda01g02130 Bda-Chr1:57297671 0 dispersed
Bda01g02130 Bda-Chr1:57297671 Bda03g00489 Bda-Chr3:4188966 0 dispersed
Bda01g02130 Bda-Chr1:57297671 Bda11g01181 Bda-Chr11:12193721 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02130 K23870 - jre:109014361 967.607