Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02132 ATGTCGGTGAATGTGTCGTGTAGGAGCAAGGTCCGTAAGAAGGGGCAAAAGCGGATACGACAGCCAAGATTTGCGTTTCTGACCAAGAGTGAGGTCGATAATCTTGAAGACGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAACAGTCCGTTCCCAAGCAGGAGTTACTACAGGTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCTGCTATTGTGATAACCACATACGAAGGTCAACATTGCCATCACACTGTTGGATTATCTCGAAGTGGAGTCATGAGACATTCTGCTTCCATTGATGGTCAGTTTCCTCCTCACTTCCCCCAGTTTTATTACCCTGAAATTGAGCTTCCACCGGAGACTCCACTTAGTGTGCCACATTTACAGCCGGACAATCATCCGGCCGGAACAAATAATATGATTTCAGAGCCAATTTCACAGCCTATTCCTCATGATCAAGGATTGCTAGGCGACATTGTCCCGAGTGGAGTGCGTAAAAGATGA 537 46.0 MSVNVSCRSKVRKKGQKRIRQPRFAFLTKSEVDNLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPAIVITTYEGQHCHHTVGLSRSGVMRHSASIDGQFPPHFPQFYYPEIELPPETPLSVPHLQPDNHPAGTNNMISEPISQPIPHDQGLLGDIVPSGVRKR 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57313980 57314873 - Bda004463.1 Bda01g02132 2132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02132 178 Gene3D WRKY domain 22 89 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g02132 178 ProSiteProfiles WRKY domain profile. 30 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g02132 178 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 103 IPR044810 GO:0003700
Bda01g02132 178 PANTHER OS03G0758000 PROTEIN 9 103 - -
Bda01g02132 178 SMART WRKY_cls 35 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g02132 178 MobiDBLite consensus disorder prediction 158 178 - -
Bda01g02132 178 Pfam WRKY DNA -binding domain 36 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g02132 178 SUPERFAMILY WRKY DNA-binding domain 28 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02132 Bda-Chr1:57313980 Bda11g01309 Bda-Chr11:14181980 7.19E-106 dispersed
Bda01g02132 Bda-Chr1:57313980 Bda11g01183 Bda-Chr11:12207069 4.90E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15510 PF03106 WRKY 6.60E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02132 - - mcha:111004648 233.032