Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02132 | ATGTCGGTGAATGTGTCGTGTAGGAGCAAGGTCCGTAAGAAGGGGCAAAAGCGGATACGACAGCCAAGATTTGCGTTTCTGACCAAGAGTGAGGTCGATAATCTTGAAGACGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAACAGTCCGTTCCCAAGCAGGAGTTACTACAGGTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCTGCTATTGTGATAACCACATACGAAGGTCAACATTGCCATCACACTGTTGGATTATCTCGAAGTGGAGTCATGAGACATTCTGCTTCCATTGATGGTCAGTTTCCTCCTCACTTCCCCCAGTTTTATTACCCTGAAATTGAGCTTCCACCGGAGACTCCACTTAGTGTGCCACATTTACAGCCGGACAATCATCCGGCCGGAACAAATAATATGATTTCAGAGCCAATTTCACAGCCTATTCCTCATGATCAAGGATTGCTAGGCGACATTGTCCCGAGTGGAGTGCGTAAAAGATGA | 537 | 46.0 | MSVNVSCRSKVRKKGQKRIRQPRFAFLTKSEVDNLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPAIVITTYEGQHCHHTVGLSRSGVMRHSASIDGQFPPHFPQFYYPEIELPPETPLSVPHLQPDNHPAGTNNMISEPISQPIPHDQGLLGDIVPSGVRKR | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57313980 | 57314873 | - | Bda004463.1 | Bda01g02132 | 2132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02132 | 178 | Gene3D | WRKY domain | 22 | 89 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g02132 | 178 | ProSiteProfiles | WRKY domain profile. | 30 | 96 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g02132 | 178 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 9 | 103 | IPR044810 | GO:0003700 | |
Bda01g02132 | 178 | PANTHER | OS03G0758000 PROTEIN | 9 | 103 | - | - | |
Bda01g02132 | 178 | SMART | WRKY_cls | 35 | 95 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g02132 | 178 | MobiDBLite | consensus disorder prediction | 158 | 178 | - | - | |
Bda01g02132 | 178 | Pfam | WRKY DNA -binding domain | 36 | 93 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g02132 | 178 | SUPERFAMILY | WRKY DNA-binding domain | 28 | 94 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02132 | Bda-Chr1:57313980 | Bda11g01309 | Bda-Chr11:14181980 | 7.19E-106 | dispersed | |
Bda01g02132 | Bda-Chr1:57313980 | Bda11g01183 | Bda-Chr11:12207069 | 4.90E-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15510 | PF03106 | WRKY | 6.60E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02132 | - | - | mcha:111004648 | 233.032 |