Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02133 ATGGACACTTTGCTTAGGCAGATGAGAGCGAAACCTCCAAAAATAGGACTGGACAACACGGAAGAGACTGGTGAAACCAAGGAGGGAAGATTACAACCTCAGAAAACCTTGTCTGGTCAAGAGAAGAAGACATCGCAAAGCTGGTTACGACGACCATTTTCTACGCAAATGGGCCGGCGCGACTCTGAGTCTAGCCATGAAGTGTACACAACTGCAGTTGCAGCAGCTGTGTATGCCATACGTTCCCAGGAAGAATCAGAAATTACCGACAAGAAGAAGACGACGGCGACTTCCGAGACGTTGTTGACAAAGCAGAAGACGAAGAAGATCAATATAACAGATCAAGAAGAAGGAAAAGTTTCAAGACGATTCTCAGATATAATTAAAAATCAGGAAGGCGAGAAGAAAAAGACAGTTGCACCTCGTGGAAAGTCGCCGGAGAAGGCTGTCCAACCAAACCCGTCCATCAAGAGAGCGTCGACTTTTCCCGATAAGAGTTCGGACAGCGCTGCCGGCAAAAACCCTGAAAGCCCGGCGCCGAAACTTAACTCTAACGTTGCAGTTAAACCCTCAACTGGACCGGCAGATGCAGAAGCTTGGGAAAGAGCTGAAATGGCGAAGATCAATAACAGGTACGAGAATCTAAACTCTACCATCCTCTCCTGGGAGAAGGAGAAGAAAGCTAAGGCTAGACGCCGCCATGACAGGACGGAGAGTGAACTATCGAGGCAAAGAGAAGAATCGTTGCTAAAATTTAACCGCGAGGTGGAATATATCAGCCATATAGCGAGTGGAGCAAGAGCCAAGGCTGCTAGTAAAAGAATAAATGAAGAGGTGACAGTGAAAGAAAAGTCAAATTTAATCAGAAGAACAGGAGAAGTCCCTCAAACATGTTTCTGCTTCTGA 906 46.47 MDTLLRQMRAKPPKIGLDNTEETGETKEGRLQPQKTLSGQEKKTSQSWLRRPFSTQMGRRDSESSHEVYTTAVAAAVYAIRSQEESEITDKKKTTATSETLLTKQKTKKINITDQEEGKVSRRFSDIIKNQEGEKKKTVAPRGKSPEKAVQPNPSIKRASTFPDKSSDSAAGKNPESPAPKLNSNVAVKPSTGPADAEAWERAEMAKINNRYENLNSTILSWEKEKKAKARRRHDRTESELSRQREESLLKFNREVEYISHIASGARAKAASKRINEEVTVKEKSNLIRRTGEVPQTCFCF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57322336 57323723 + Bda004464.1 Bda01g02133 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02133 301 MobiDBLite consensus disorder prediction 1 67 - -
Bda01g02133 301 Pfam Remorin, C-terminal region 195 296 IPR005516 -
Bda01g02133 301 MobiDBLite consensus disorder prediction 109 143 - -
Bda01g02133 301 MobiDBLite consensus disorder prediction 15 29 - -
Bda01g02133 301 MobiDBLite consensus disorder prediction 83 198 - -
Bda01g02133 301 MobiDBLite consensus disorder prediction 30 53 - -
Bda01g02133 301 MobiDBLite consensus disorder prediction 154 190 - -
Bda01g02133 301 Coils Coil 205 225 - -
Bda01g02133 301 Coils Coil 227 247 - -
Bda01g02133 301 PANTHER OS02G0116800 PROTEIN 3 300 - -
Bda01g02133 301 PANTHER REMORIN FAMILY PROTEIN 3 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02133 Bda-Chr1:57322336 Bda03g01615 Bda-Chr3:55431443 2.51E-07 dispersed
Bda01g02133 Bda-Chr1:57322336 Bda07g01443 Bda-Chr7:26801945 8.63E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02133 - - qlo:115978873 212.231