Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02135 ATGTATAGGACTGTTGGTGCGGCGGCAGCTTCTACCACAACCGCGACGGTGAGCAAAGGAGGATCACCGTCGGATAGTGTGGATTATGTGGTTACTTTGGATCAGGTTCCGCGGTGGAGCGATGCAGAATTTAGATCTTCACTTGAACTTGAAGGCGAAGACGCTTCTTTCTCTAATTCTTACTTCCCTGATCCTTTGACCTCTTTGTCTGGGCCAGAGAGCGGTGTAAATGGAATGGTTTCGAGATTTCCGGTCGATCACGAAATTAATTCCAAGATATATCTTTGGAGAGGGAATCCATGGAATCTCGAGGTAGATGCTGTGGTCAATTCTACAAATGAGAGTTTGGATGAGGCAAACAGCAGCACAGGATTGCACTCTGCAGCTGGATCTGGTCTTGCCGAAGAATGTGCTTCCATGGGTGGTTGTCGGACGGGGATGGCAAAAGTAACTAATGCATATGACCTTCCGGCTAGGAAGGTCATACATACTGTCGGTCCAAAGTATGCAGTAAAATATCATACTGCAGCAGAGAATGCTTTAAGTCATTGTTATCGATCTTGCCTTGAACTTCTTATTGAAAATAGACTTCAAAGCATTGCAACAAGCTGTATATACAACGAGAATAAAAACTATCCTCGTGAACCTGCTGCGCATGTGGCTATAAGGACTGTGAGGCGGTTTCTCGAGAAGCAAAAAGATAAAATTAAAGCAGTTGTATTTTGTACTGCCACATCATCAGACACTGAGATATACAAGAGGTTGCTTCCCCTTTACTTTCCACGTGATAAACATGAAGAGGAAATTGCTATATCAAAGCTTCCTGCAGATGTAGGAGATGAGAATGGTGAGACTATAATAGATGAACGAAAGATCAGGATAAAGCCTTTGCCGAAAAAGAATATTCCAAAACCTCCTCAAGCTCCTGATGATCCTCCTATTAGTAGTGTTGGCTTGGCACGAAGGAGTTCTTCCTATTTGGATTCATATTTGGATCCTGCTTTTATGTCCTTGATCAAAGACCCCGATCAGAGACGCAGAGAGCAATGGGAAAAAACTGCTCAGGCGCAGAGTGGATGGAATTGTGCTAAAATGCTTGGATTTGGAGATCTTGGTGGACCTCCGCTATCTGCCGCCGAAGAATACTCACTTCATTCAAGATATCTTGCTAAAGCAAATTCTTTAAACTTGTCGGAAATTGCAGAAATGAAAATAATTTATCGTGGTGGGGTTGATAGTGAGGGTCATCCGGTAATGGTTGTTGTTGGAGCACATTTTCTCCTGCGATGCCTTGATCTGGATCGTTTTGTTCTTTATGTCATAAAGGAATTTGAGCCATTGATACAGAAGCCTTATACAATTGTCTACTTCCATTCGGCAGCATCTTTACAGCCCCGACCTGACATGGGATGGATGAGAAGACTACAACAAATACTTGGCCGCAAACACCAGCGTAATCTTCACGCCATCTATGTTCTTCATCCATCATTTGGACTAAAGACTACAATTTTTGCCATGCAACTGTTTGTAGACAATGTGGTATGGAACAAAGTGGTGTACGTCGATAGGCTTCTGCAGTTGTTTCGATACGTTCCTCGTGAACAGTTGACTATTCCAGATTTTGTCTTCCAGCATGACTTGGAAGTAAATGGAGGGAAGGGCGTTATAGTCGACCCTCGAACAAAATATGTCTATCGTCGACCATAA 1707 43.23 MYRTVGAAAASTTTATVSKGGSPSDSVDYVVTLDQVPRWSDAEFRSSLELEGEDASFSNSYFPDPLTSLSGPESGVNGMVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNESLDEANSSTGLHSAAGSGLAEECASMGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENRLQSIATSCIYNENKNYPREPAAHVAIRTVRRFLEKQKDKIKAVVFCTATSSDTEIYKRLLPLYFPRDKHEEEIAISKLPADVGDENGETIIDERKIRIKPLPKKNIPKPPQAPDDPPISSVGLARRSSSYLDSYLDPAFMSLIKDPDQRRREQWEKTAQAQSGWNCAKMLGFGDLGGPPLSAAEEYSLHSRYLAKANSLNLSEIAEMKIIYRGGVDSEGHPVMVVVGAHFLLRCLDLDRFVLYVIKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMRRLQQILGRKHQRNLHAIYVLHPSFGLKTTIFAMQLFVDNVVWNKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGVIVDPRTKYVYRRP 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57327029 57332135 + Bda004466.1 Bda01g02135 2135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02135 568 MobiDBLite consensus disorder prediction 295 317 - -
Bda01g02135 568 Gene3D - 398 549 IPR036865 -
Bda01g02135 568 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 11 548 - -
Bda01g02135 568 CDD Macro_GDAP2-like 91 259 IPR035793 -
Bda01g02135 568 Pfam Macro domain 109 221 IPR002589 -
Bda01g02135 568 ProSiteProfiles Macro domain profile. 80 260 IPR002589 -
Bda01g02135 568 SUPERFAMILY CRAL/TRIO domain 397 536 IPR036865 -
Bda01g02135 568 SUPERFAMILY Macro domain-like 81 289 IPR043472 -
Bda01g02135 568 Pfam Divergent CRAL/TRIO domain 415 546 IPR001251 -
Bda01g02135 568 SMART YBR022w_8 92 221 IPR002589 -
Bda01g02135 568 SMART sec14_4 396 545 IPR001251 -
Bda01g02135 568 CDD SEC14 403 539 IPR001251 -
Bda01g02135 568 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 11 548 - -
Bda01g02135 568 Gene3D Leucine Aminopeptidase, subunit E, domain 1 22 265 IPR043472 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02135 Bda11g01188 CCT
Bda01g02135 Bda11g01188 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02135 Bda-Chr1:57327029 Bda11g01314 Bda-Chr11:14204465 6.22E-53 dispersed
Bda05g01027 Bda-Chr5:58730387 Bda01g02135 Bda-Chr1:57327029 2.25E-10 transposed
Bda01g02135 Bda-Chr1:57327029 Bda11g01188 Bda-Chr11:12237670 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02135 K24997 - mnt:21400244 983.015