Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02136 ATGGGTACGAAAATGCAGTACAAAAGTTCCTTGCCAGGATATCACTCGATGAGGGATCTCAATGAGGATTTCAATAGTTGCAGTGGCCCCTTATATTTCACCGATAGGATCTTTCCAAACAGACAATCTTACAATAAAATCTCATCAAAGGCCACAGCTGATGTATACAGAGGCAGTGATAGGGATGTACTGAAGCTAACAATGCTTGAACAAGAAGCCATTTTCAAGTATCAGGTATATGAGTTGCACAGGTTATATAGAATACAAAGAGATTTAATGGATGAAGTGAGAAGACGCAGAAACCATATGGCCGGAGTGGCATCATTTACTTCAAGTCCCTTAGCATCTGAAGAAGCTCGAAAATGTCGTGTGGCAAATTCATCTAGCGCCGGACTGTCATGTGTTAAAGATAATCATTCTTCTTTGAAAGACGATGAGGGGCTAGTGTCCAGGCCAAGAAAAGTAGGGAGAAAAATGTTTGATCTTCAACTTCCTGCCGATGAGTACATCGACAGTGAAGATGAGGAACATTTTGATGATGAAGGAGCATCCGGAGAAGGTCAAGGTGTTGATCTTTCTGGCAAGCCAATGTTGCAGCTTCTGGATTTTCAGAGAGAAATCACTAGAAATGGATGTCAAAATGCGACCAAAATAAACAGAGGAGGGACGTTTCCTTGCATGCTAGAAGCAGGGTACAGCAAAAGCAATGAAAAACCTCATGTTTCTCAAGGACTCCAACAAAAGGAAAAGGTTCCCATTTCTTCCAAGCCGATGCGAGCTTTTTGCAGCGAAGTTAATGAGACTCGAGCTTTTTATTTAGACAATAAATGGAAAGAATGTCAGTGGAAAGATGGGCCAGTTTATGATATGCAATTCAGCGAAATATGCCATAACGGAGTGGATTCTAAGCATGGAGAAGCCTTGGTGTCATCTAGTGTGTCGGATGGGTACCAATTTTCTCTGTTCGATTTGGGAAAAGCTCGGCCTTGTTCATCGTCGCCGTGGGAAAATTTGAACTGGAATGCATTTAGTGGTCAAATGCATCCATCGTCCAACACTGCCACTTCATTGCATAAAAGTTCTGATTCAACTGGTTATAATTCTCCTCTCCATGTTGATCGCGGTTTGGCAAAATTAAACTTTTCGAAGGATAGTAGCTTCAACAGGGTTATATCCAGTAGCGGATCGAACGAGGAAGAACAGAGGAGCAAAAACGAGAAGAATCATTCAATGTTGTCGTGGCTTAGAATTACGCCTTCTACTAGGAATGAGGCTGACAATCCAGGAAGGTTTTCAAAAATGGAGGAAGTTGGTTTTACACAATTTCCGATGGATCAACTGCTGGATAATTGGAGTATTGAAAAGGTTTCTGATCAGAATTTGACTCGGAATATGAAATCTGGGTCGTCTACTTGCAGCAGAAAACTTTTAGGATTTCCCATTTTTGAATCGAAAAATAACAAGTATTTTTCTCTTACCTCAAACGATGGGTCTCCATCTCGATCATCCAATGGCGAAGCAAAAGACGAATGCAAAGCCATTGAACTTGACATCAATTTATCTTGTGATCCACTTGATTTCGAGGAAGGGAAACAAACTATTGATTTGAATTCTTGTTTTATAGTTGATGATGAAGCCCCTGCTAGAACTGCCACCTCAAGAACAGATAAAAGGGTACTTGCAGAGATTGACTTGGAATATCCTGCTCTCCCTGAGACCGAGGAGAACATTATTCCTCGAGAAGAAGCTACGGAAAAGTACGAAGGTGTAAATCAACAAAATGAAGTTGTAAAAATGGCAGCAGAAGCTATAGTAGCGATTTCTTCGATGAGTTGTGATCATACTTCTGACAATGCAGCTAAGAACTTATCAGAAGATTCTTCAGGTGACTTTCTTAATTGGTTTGCCAAAGTTGTTCTATGTGGTGGAGATGAACTTAGCGAGGAGGATAATGGTAATAAATGTTCGGAAGACGCAGATTTCTTCGAAATGATGACGCTCAGATTGACAGAAACAAATAAAGAAGAGCACATTCCTCCCCCTTTGGTTTTAAAAGATGCAAAAGTTGAAGAAAGAAGACCCACCAAATTGCTAAATCGAGGCCGAAAAGGCCAAGCAAGGAGAGGGCGGCAACAAAGGGACTTCCAGAGGGACATTCTTCCTGCCATTGCGTCTTTATCACAACAAAAAGTCAAGGAAGATATTCAAATATTCGAGGGGATAATGAGAGAAATTGGCCATTCACTGCCATCCGGATTAGCTCGGAGAAACTCCAAGAAGAACAATTGTGCTTCCCCTCCGAGCCGACGAAGAACAATAATCACTACCCCTGCTTGGACCATAGTAGGTCTTGACGATATGAACCTGAAAGGGTGGGGAAAGACTACCAGGCGGCCACGACGACAACGATGTGCAGGTGGAAACCCTCATTACATTCAAGGGCAAGAGTAG 2451 41.86 MGTKMQYKSSLPGYHSMRDLNEDFNSCSGPLYFTDRIFPNRQSYNKISSKATADVYRGSDRDVLKLTMLEQEAIFKYQVYELHRLYRIQRDLMDEVRRRRNHMAGVASFTSSPLASEEARKCRVANSSSAGLSCVKDNHSSLKDDEGLVSRPRKVGRKMFDLQLPADEYIDSEDEEHFDDEGASGEGQGVDLSGKPMLQLLDFQREITRNGCQNATKINRGGTFPCMLEAGYSKSNEKPHVSQGLQQKEKVPISSKPMRAFCSEVNETRAFYLDNKWKECQWKDGPVYDMQFSEICHNGVDSKHGEALVSSSVSDGYQFSLFDLGKARPCSSSPWENLNWNAFSGQMHPSSNTATSLHKSSDSTGYNSPLHVDRGLAKLNFSKDSSFNRVISSSGSNEEEQRSKNEKNHSMLSWLRITPSTRNEADNPGRFSKMEEVGFTQFPMDQLLDNWSIEKVSDQNLTRNMKSGSSTCSRKLLGFPIFESKNNKYFSLTSNDGSPSRSSNGEAKDECKAIELDINLSCDPLDFEEGKQTIDLNSCFIVDDEAPARTATSRTDKRVLAEIDLEYPALPETEENIIPREEATEKYEGVNQQNEVVKMAAEAIVAISSMSCDHTSDNAAKNLSEDSSGDFLNWFAKVVLCGGDELSEEDNGNKCSEDADFFEMMTLRLTETNKEEHIPPPLVLKDAKVEERRPTKLLNRGRKGQARRGRQQRDFQRDILPAIASLSQQKVKEDIQIFEGIMREIGHSLPSGLARRNSKKNNCASPPSRRRTIITTPAWTIVGLDDMNLKGWGKTTRRPRRQRCAGGNPHYIQGQE 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57335386 57338569 - Bda004467.2 Bda01g02136 2136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02136 816 MobiDBLite consensus disorder prediction 389 412 - -
Bda01g02136 816 PANTHER - 1 365 - -
Bda01g02136 816 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 1 365 - -
Bda01g02136 816 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 347 806 - -
Bda01g02136 816 MobiDBLite consensus disorder prediction 792 816 - -
Bda01g02136 816 PANTHER - 347 806 - -
Bda01g02136 816 Pfam Plant protein of unknown function (DUF863) 206 365 IPR008581 -
Bda01g02136 816 Pfam Plant protein of unknown function (DUF863) 135 185 IPR008581 -
Bda01g02136 816 Pfam Plant protein of unknown function (DUF863) 381 804 IPR008581 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02136 Bda-Chr1:57335386 Bda15g00615 Bda-Chr15:9328508 3.01E-12 dispersed
Bda01g02136 Bda-Chr1:57335386 Bda11g01467 Bda-Chr11:20609690 6.07E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02136 - - cpap:110823976 397.127