Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02167 | ATGTCAAGCAATTGGATGGCTTTCTTCCCTACAAATTTCATCCCACAAGTTCCCCAGGAAGATGAACATCAACCTCCCTCTACTCTGAGCTCGATTCTTCCCCCGTGTACTCCTCAGGACTTTCATGGAGTGGCGTCGTTTTTAGGGAAGAGATCCATGTCGTTTTCTGGAATTGAAATGGGTGAAGAAGCAAACAATGGGGAGGATGATTTGTCGGACGATGGATCGCAAGCAGGAGAGAAGAAGAGGAGGCTAAACATGGAGCAGGTGAAGACTCTGGAGAAGAACTTCGAGCTGGGAAATAAGCTGGAGCCGGAGAGAAAAATGCAATTGGCTCGAGCTCTTAATCTGCAGCCTCGACAGATTGCGATTTGGTTTCAGAACAGAAGAGCTAGGTGGAAGACGAAGCAGTTGGAGAAAGATTACGATCTTCTCAAACGACAGTTGGAAGCCATTAAAGCTGATAACGAAGCGCTACAGACCCAAAATCAAAAGCTTCAGTCTGAGATATTGGCTCTGAAAAGTAGAGAGCCTACAGAATCGATCAATCTGAACAAGGAAACAGAAGGATCATGCAGCAACCGGAGCGAGAACAGCTCCGATGTAAAACTGGATATTTCTAGAACACCCGCCATCGATAGCCCTTTATCCAACCATCCAACGAGCAGGCCTTTGTTTCCAGCCGCCATTAGAGCGCCTGGCGTAACTCAGCTCTTTCAGAACCCATCGAGATCTGAGCTCCATTGCCATAAGATCGATCAGATGGGGAAAGAAGAAAGCCTCAGCAACATGTTTTGCGGGATCGATGATCAGTCCGGCGGGCTGTGGCCGTGGTTGGAGAATCAACATTTCAATTGA | 858 | 47.55 | MSSNWMAFFPTNFIPQVPQEDEHQPPSTLSSILPPCTPQDFHGVASFLGKRSMSFSGIEMGEEANNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQLEAIKADNEALQTQNQKLQSEILALKSREPTESINLNKETEGSCSNRSENSSDVKLDISRTPAIDSPLSNHPTSRPLFPAAIRAPGVTQLFQNPSRSELHCHKIDQMGKEESLSNMFCGIDDQSGGLWPWLENQHFN | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57581698 | 57582967 | + | Bda004505.1 | Bda01g02167 | 2167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02167 | 285 | MobiDBLite | consensus disorder prediction | 184 | 202 | - | - | |
Bda01g02167 | 285 | MobiDBLite | consensus disorder prediction | 61 | 85 | - | - | |
Bda01g02167 | 285 | MobiDBLite | consensus disorder prediction | 181 | 202 | - | - | |
Bda01g02167 | 285 | Gene3D | - | 73 | 142 | - | - | |
Bda01g02167 | 285 | Pfam | Homeobox associated leucine zipper | 136 | 176 | IPR003106 | GO:0006355|GO:0043565 | |
Bda01g02167 | 285 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 | 4 | 285 | - | - | |
Bda01g02167 | 285 | SUPERFAMILY | Homeodomain-like | 71 | 138 | IPR009057 | - | |
Bda01g02167 | 285 | ProSiteProfiles | 'Homeobox' domain profile. | 76 | 136 | IPR001356 | GO:0003677 | |
Bda01g02167 | 285 | Coils | Coil | 128 | 176 | - | - | |
Bda01g02167 | 285 | ProSitePatterns | 'Homeobox' domain signature. | 111 | 134 | IPR017970 | GO:0000981|GO:0006355 | |
Bda01g02167 | 285 | SMART | HOX_1 | 79 | 140 | IPR001356 | GO:0003677 | |
Bda01g02167 | 285 | Pfam | Homeodomain | 81 | 134 | IPR001356 | GO:0003677 | |
Bda01g02167 | 285 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 4 | 285 | IPR045224 | GO:0003700 | |
Bda01g02167 | 285 | CDD | homeodomain | 81 | 137 | IPR001356 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g02167 | Bda07g01460 | CCT | |
Bda01g02167 | Bda11g01227 | CCT | |
Bda01g02167 | Bda07g01460 | ECH | |
Bda01g02167 | Bda11g01227 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02167 | Bda-Chr1:57581698 | Bda04g00102 | Bda-Chr4:2183130 | 1.13E-37 | dispersed | |
Bda01g02167 | Bda-Chr1:57581698 | Bda11g01227 | Bda-Chr11:12694178 | 0 | wgd | |
Bda01g02167 | Bda-Chr1:57581698 | Bda07g01460 | Bda-Chr7:27137122 | 2.23E-126 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15515 | PF00046 | Homeodomain | 7.00E-15 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02167 | K09338 | - | qsu:112032056 | 471.085 |