Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02167 ATGTCAAGCAATTGGATGGCTTTCTTCCCTACAAATTTCATCCCACAAGTTCCCCAGGAAGATGAACATCAACCTCCCTCTACTCTGAGCTCGATTCTTCCCCCGTGTACTCCTCAGGACTTTCATGGAGTGGCGTCGTTTTTAGGGAAGAGATCCATGTCGTTTTCTGGAATTGAAATGGGTGAAGAAGCAAACAATGGGGAGGATGATTTGTCGGACGATGGATCGCAAGCAGGAGAGAAGAAGAGGAGGCTAAACATGGAGCAGGTGAAGACTCTGGAGAAGAACTTCGAGCTGGGAAATAAGCTGGAGCCGGAGAGAAAAATGCAATTGGCTCGAGCTCTTAATCTGCAGCCTCGACAGATTGCGATTTGGTTTCAGAACAGAAGAGCTAGGTGGAAGACGAAGCAGTTGGAGAAAGATTACGATCTTCTCAAACGACAGTTGGAAGCCATTAAAGCTGATAACGAAGCGCTACAGACCCAAAATCAAAAGCTTCAGTCTGAGATATTGGCTCTGAAAAGTAGAGAGCCTACAGAATCGATCAATCTGAACAAGGAAACAGAAGGATCATGCAGCAACCGGAGCGAGAACAGCTCCGATGTAAAACTGGATATTTCTAGAACACCCGCCATCGATAGCCCTTTATCCAACCATCCAACGAGCAGGCCTTTGTTTCCAGCCGCCATTAGAGCGCCTGGCGTAACTCAGCTCTTTCAGAACCCATCGAGATCTGAGCTCCATTGCCATAAGATCGATCAGATGGGGAAAGAAGAAAGCCTCAGCAACATGTTTTGCGGGATCGATGATCAGTCCGGCGGGCTGTGGCCGTGGTTGGAGAATCAACATTTCAATTGA 858 47.55 MSSNWMAFFPTNFIPQVPQEDEHQPPSTLSSILPPCTPQDFHGVASFLGKRSMSFSGIEMGEEANNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQLEAIKADNEALQTQNQKLQSEILALKSREPTESINLNKETEGSCSNRSENSSDVKLDISRTPAIDSPLSNHPTSRPLFPAAIRAPGVTQLFQNPSRSELHCHKIDQMGKEESLSNMFCGIDDQSGGLWPWLENQHFN 285
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 57581698 57582967 + Bda004505.1 Bda01g02167 2167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02167 285 MobiDBLite consensus disorder prediction 184 202 - -
Bda01g02167 285 MobiDBLite consensus disorder prediction 61 85 - -
Bda01g02167 285 MobiDBLite consensus disorder prediction 181 202 - -
Bda01g02167 285 Gene3D - 73 142 - -
Bda01g02167 285 Pfam Homeobox associated leucine zipper 136 176 IPR003106 GO:0006355|GO:0043565
Bda01g02167 285 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 4 285 - -
Bda01g02167 285 SUPERFAMILY Homeodomain-like 71 138 IPR009057 -
Bda01g02167 285 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Bda01g02167 285 Coils Coil 128 176 - -
Bda01g02167 285 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Bda01g02167 285 SMART HOX_1 79 140 IPR001356 GO:0003677
Bda01g02167 285 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Bda01g02167 285 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 285 IPR045224 GO:0003700
Bda01g02167 285 CDD homeodomain 81 137 IPR001356 GO:0003677
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02167 Bda-Chr1:57581698 Bda04g00102 Bda-Chr4:2183130 1.13E-37 dispersed
Bda01g02167 Bda-Chr1:57581698 Bda11g01227 Bda-Chr11:12694178 0 wgd
Bda01g02167 Bda-Chr1:57581698 Bda07g01460 Bda-Chr7:27137122 2.23E-126 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15515 PF00046 Homeodomain 7.00E-15 CL0123 Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02167 K09338 - qsu:112032056 471.085