Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02177 ATGGAGTTTTCTCAGGAAGATTTCGATCGCCTCCTCCTGTTCGAGCACACCAGAAAAGTTGCCGAAGTTAACTATGCCAAGGACCCTCTTGACGCCGATAATCTATTGAAGTGGGGAGGAGCATTGCTCGAATTGTCACAGTTCCAAAATGTTGCAGACTCCAAGGCTATGATCAAAGATGCTGAGCTAAAGCTGGAGGAGGCTTTGCAAATCAATCCCCTCAAGCACGAAGCGTTATGGTGTCTGGGAAATGCTCACACCTCTCATGCATTTCTAACACCTAACCCCGAAGAGGCAAAAGTTTATTTTGATAAAGCACATGAATGCTTCCAAAAAGCTGTTGATGGGGACCCCAGTAATGAACTCTATCTCAAGTCTTTGGAAGTCACAACAAAGGTGATTACTTTCTTTACTCCTTTAGTTATATTGAAGTTAATGACCCTGCTCACTCAGGCACCAGACTTTCACTCGGAGCTACATAAGCATGGGCTTGATCAACAGATTACTGGCGGGACATCTGCTACTTCTGCATCTGCTTCCTCAATTCCAAAGAGTTCAAAGAAGAAGAAGAGCGAGGATTTCAAATACGACGTATTTGGATGGATAATACTGGTGGTCGGGATCGTTGCATGGGTAGGAATGACAAAATCCCATGTGCCCTCCACAGCCCCCCCAAATGAGAGGAAAACGTTGGAGATTTCACCATGCATTCATGCTACAATATTATTGTCTTTTCGATGTATTATTTTGTTCAGTGTAGGTTTCTATCTGTTACTTTGCTGCTGGAGCATAGTTGAAATCTTCCTAAGATTGGAATTCTCAGCTTGGAAAATGCAGAGAAAAAAGAAGAGTTCTGGAAGAAATGGTTCACGAGAACTCGCCAATTCCAAGGTCTCAAGAGCTCAAAGGAAGGTTTCAGAGAGTTCACAGGTCACAGAAAAGAACGTATCGGAACTAATTGCATCTTCAGCTAAAAAACAGGCTCCTGAAGTGTTTCCGAAAAAGAGTGTGGAATCTAAGTATTGTTCATTAAGAGATGAGACTTCTGGTGCTTGTTTAGCTCCTGAGGCAACTAAAGCTGTGTCTTGTAAGAGTTATCCTCATGAACTATCTCATGCTGGTTCAGAATCTATCTTTTCTCCTTTTCACATATCTAAACATGCCGAAGCTGACATGCCTGAGGGAGAATTAGAGGGAAAAGCTTTATCATCTGAAGTCTCAGCGATATATCTGGCTATGAAAAACTCTAGGCTGGAATGCGTTGATGAGCATGATCAAAATCACCTTTCTACTGAAGGATACATGCAGGAGGATGAAGATGAAGAGTTTGATGATTTTGATCCTTATTTCTTCATCAAGAACTTGCCAGAGTTGGCAGCAGTAGTCCCAACATATCGTCCTCTGCTTCTACCCAAACAGACACGGAGTTGCCCTCCCACTACTCTTGTTTTAGACTTGGATGAAACTTTGGTGCATTCCACTCTAGAACCTTGTGTCGATGCAGACTTTACTTTTCCCGTCAATTTTAACCTCCAGAAGCATACAGTTTATGTTCGATGCCGCCCTTATCTTAAAGATTTTATGGAGAGGGTTTCTGGATTTTTTGAAATTATTATTTTTACTGCTAGTCAAAGCATTTATGCCGAGCAACTCTTAAATGTTCTTGATCCAAAGAGAAAGACCTTTAGACATCGCGTCTTTCGTGAATCTTGTGTTTTTGTTGATGGGAATTACCTCAAAGATTTATCCATTCTTGGTCGTGATTTGGCACATGTGATTATAGTTGACAACTCTCCACAGACGAGGAACTTACTTCGCATCGCTATATTCAACATCAGCTACATCAGAGGGCTGTTCCCTGAAAAGTATTTTAATGACAAGTCTGTTCCTGCCTTGGAGATGAAGATCAAGAAGCTTATGCCGATGGATGCAGAATCTCGCAGACTGATAGATTGGATGGAAAAAGGCGTATACGACGCATTGCAGAAAAAGTACCTTAAAACTCTTCTGTTCTGTGTGTGCGAAGCTGTAGATGGTCCAATGATTGAGGAATATGCATTTTCATTCAGTTATTCAAGTTCCGATACTGAAGAGGTTTCAATGAATATCCATCGCACTGGTAACAAGAGACAGGGTGAAGCATTCAAATGTAACTCCACCTCAGAAATTACACCCAACCAAATGAGGAGTTCTGCATGTAAGATGGTGCGTACACTAGTTCAACTTATGAGAACTCTGGATAGGATGCCTGAAGAGCGTGCTATATTGATGAAACTTCTCTACTACGATGATGTTACGCCAGTGGATTATGAACCTCCATTTTTCAGATGCTGTATAGAGGGCGAAGCTCATAATCCATGGGCTAGAAATCCTCTGAAAATGGAGGTTGGGAATGTCAACAGCAAGCATTTTGTATTGGCTCTTAAAGTACAGAGTATACTTGATCCGTGTGACGATGAAAATGATGAGATAGAAGATAACGAGGTGAGTCTAGGAGCTGATTCGGTTGAGAAGGGAGAATACTCTGAATCTGATAGCGAGGTTGATCATTTACCAGACGACAATTATGTTGTAGCACCAGTTGGTAGATTACATAAAACTCAGCATACGGGTTATTGTAACTTTACTTATTTATGTGCAGATGATACTCAGGATCCAGAGGAAAATGAACAGCAGATGAACCGAGTGAAGGATTGGATCCAGAATCGCCACCTGGACACCATAGATCTAACAGATATTCTGTCGCATTTCCCAGACATCTCAGTGTGGATGATTCCAGAAATAATGGATAAGCTAGTTAATGAAGGTTTTCTGTCAAAGACTCGAATGGACTCATATACGATTAACAGGCATAAGAAGTTCGACTATGAATTTACAACTGTGAAAGATGAAACGGATGGTCAAATAATTCCCGTTGGTGACAAAGCACCAAAAGGAGATGATCTCTTGTATACGAAGGCTCTGTATCATGCTCTTCCGATGAAATATGTGACTGTTGCAAAACTTCAAGCTATGCTTGAAGGAGAGGTTAATCAGACTACTGTGCGAAAATTAATTGATAAAATGACCCGAGATGGTTTTCTTGAAGCCAAAGGAAATCGACGGCTAGGTGTGTGCCAAATTGAAACATTTAGACCTAGATTTCCTATACTAAAGAAAAAACGGGTTAACATTTTGCAACTTGCTCGCACAGGCAAGCGTGTAATTCATTCTGATATGACCGAGAAAAAGCTGATGGAAGTAAAGATAGCTTTAAACGGAGACGCAATGGAAGTCGACAAGGAACCTCATATGAGGCCATACCATCTAGATATCTCCACAATGGGTTCCGGTAGTAACTACAAAGACATGTCTACATGCGGCCTCCTCCATTCCATAGGATCAGACCTCACACGTATGAAAGTGAGATCTGACACTGTGCAAAATGATTCGATGAGGAGTGAACAGACTATTTCAAAGCTTGGAAACACTCCTACGAGCAGGGATGAGCCAGTGACTTCAAGAGAGAGCTTTGTACCGGGGAATGAGATGAACAGAAACAATGGAAATGTAGATGAGGTGGATATGGTTATCTGTAGATCAACTCAAGACAAGCGGTCAAGAAAGACGAGCACTGTGAACTCATACCCAACAGTTAGAGGGTTTACAGCAATAGGAACTGGCGGTGATGATTTTGTGCAAGCAATGGTTGTTGCTGTTGAATCTGTAATCCAACAGCCAATTCCCCAGGTTTGTTTTTACCACATTCCCATAATACTGGATCTCTGCACTAGTAGTCTAAAATATTATAATTCACAACAGGGGCGAGTGAGGCAGAAGTTGTCATCAAGGGGGAAATATGTGTCAGTCAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTCCAAGCTGTATACAACGCCATGAGGAGAGATGATAGGATGAAATACTTTCTCTAG 3942 41.6 MEFSQEDFDRLLLFEHTRKVAEVNYAKDPLDADNLLKWGGALLELSQFQNVADSKAMIKDAELKLEEALQINPLKHEALWCLGNAHTSHAFLTPNPEEAKVYFDKAHECFQKAVDGDPSNELYLKSLEVTTKVITFFTPLVILKLMTLLTQAPDFHSELHKHGLDQQITGGTSATSASASSIPKSSKKKKSEDFKYDVFGWIILVVGIVAWVGMTKSHVPSTAPPNERKTLEISPCIHATILLSFRCIILFSVGFYLLLCCWSIVEIFLRLEFSAWKMQRKKKSSGRNGSRELANSKVSRAQRKVSESSQVTEKNVSELIASSAKKQAPEVFPKKSVESKYCSLRDETSGACLAPEATKAVSCKSYPHELSHAGSESIFSPFHISKHAEADMPEGELEGKALSSEVSAIYLAMKNSRLECVDEHDQNHLSTEGYMQEDEDEEFDDFDPYFFIKNLPELAAVVPTYRPLLLPKQTRSCPPTTLVLDLDETLVHSTLEPCVDADFTFPVNFNLQKHTVYVRCRPYLKDFMERVSGFFEIIIFTASQSIYAEQLLNVLDPKRKTFRHRVFRESCVFVDGNYLKDLSILGRDLAHVIIVDNSPQTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSSSDTEEVSMNIHRTGNKRQGEAFKCNSTSEITPNQMRSSACKMVRTLVQLMRTLDRMPEERAILMKLLYYDDVTPVDYEPPFFRCCIEGEAHNPWARNPLKMEVGNVNSKHFVLALKVQSILDPCDDENDEIEDNEVSLGADSVEKGEYSESDSEVDHLPDDNYVVAPVGRLHKTQHTGYCNFTYLCADDTQDPEENEQQMNRVKDWIQNRHLDTIDLTDILSHFPDISVWMIPEIMDKLVNEGFLSKTRMDSYTINRHKKFDYEFTTVKDETDGQIIPVGDKAPKGDDLLYTKALYHALPMKYVTVAKLQAMLEGEVNQTTVRKLIDKMTRDGFLEAKGNRRLGVCQIETFRPRFPILKKKRVNILQLARTGKRVIHSDMTEKKLMEVKIALNGDAMEVDKEPHMRPYHLDISTMGSGSNYKDMSTCGLLHSIGSDLTRMKVRSDTVQNDSMRSEQTISKLGNTPTSRDEPVTSRESFVPGNEMNRNNGNVDEVDMVICRSTQDKRSRKTSTVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPIPQVCFYHIPIILDLCTSSLKYYNSQQGRVRQKLSSRGKYVSVNIGPVQVISSEQVQAVYNAMRRDDRMKYFL 1313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57770016 57788314 - Bda004520.2 Bda01g02177 2177

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02177 1313 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1065 1206 - -
Bda01g02177 1313 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 602 1041 - -
Bda01g02177 1313 SUPERFAMILY The spindle assembly checkpoint protein mad2 602 817 IPR036570 -
Bda01g02177 1313 SMART forpap2 478 617 IPR004274 -
Bda01g02177 1313 CDD HAD_FCP1-like 481 607 - -
Bda01g02177 1313 Pfam NLI interacting factor-like phosphatase 481 602 IPR004274 -
Bda01g02177 1313 Gene3D Tetratricopeptide repeat domain 1 140 IPR011990 GO:0005515
Bda01g02177 1313 SUPERFAMILY HAD-like 469 610 IPR036412 -
Bda01g02177 1313 MobiDBLite consensus disorder prediction 289 310 - -
Bda01g02177 1313 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 216 - -
Bda01g02177 1313 Pfam HORMA domain 602 803 IPR003511 -
Bda01g02177 1313 Gene3D HORMA domain 598 854 IPR036570 -
Bda01g02177 1313 Gene3D - 1200 1313 - -
Bda01g02177 1313 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 1065 1206 - -
Bda01g02177 1313 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 602 1041 - -
Bda01g02177 1313 SUPERFAMILY TPR-like 25 127 IPR011990 GO:0005515
Bda01g02177 1313 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 480 603 IPR011948 GO:0016791
Bda01g02177 1313 ProSiteProfiles HORMA domain profile. 595 810 IPR003511 -
Bda01g02177 1313 SUPERFAMILY YbeD/HP0495-like 1202 1313 IPR027471 -
Bda01g02177 1313 Coils Coil 51 71 - -
Bda01g02177 1313 Pfam Protein of unknown function (DUF493) 1267 1313 IPR007454 -
Bda01g02177 1313 ProSiteProfiles FCP1 homology domain profile. 475 642 IPR004274 -
Bda01g02177 1313 MobiDBLite consensus disorder prediction 1139 1182 - -
Bda01g02177 1313 MobiDBLite consensus disorder prediction 284 310 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02177 K12778 HORMAD, HOP1; meiosis-specific protein - qsu:112001538 794.267
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02177 Bda-Chr1:57770016 Bda07g01393 Bda-Chr7:16729340 6.52E-76 dispersed
Bda01g02177 Bda-Chr1:57770016 Bda03g01401 Bda-Chr3:50764808 7.47E-10 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1253 . . Bda01g02177 . . . . . Cmo04g01936 . . Cma18g00692 . Car18g00641 Sed04g0293 Cpe09g00593 Cpe01g01619 Bhi07g01930 Tan04g0042 Cmetu10g0783 Lac13g0048 Hepe10g1511 . . . . . . . . . . . . . . . . Cme10g00667 . . . . . . Bma01g00007 . . . . Cma04g01839 . . . . . . . . . . . . Cla11g01333 Cam11g1392 Cec11g1414 Cco11g1410 Clacu11g1550 Cmu11g1371 Cre11g1789 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002827 1 3 1 1 2 1 3 1 1 1 1 1 2 2 2 2 1 3 2 1 1 2 2 2 1 2 2 4 5 2 55