Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02181 ATGGTGTTGGGGTTGAGCGCCGATGATGTTTCTGGATACAAATTGCTGGCGTGCTTGATGCTCTTGTTCACCTTCATGTCCAATGTGGTCTACAATGTCCTGCATCTCAACTCCATTAACCCCCTCGGATTAAACGCCCCTCCCAACCTTTTCTCCGAAGCTAGGGCTCTTGAACATGTTCGGGTTCTCACCAAACAGATCGACGGCCGCCAAGAGGGACGTCCTGGTTTGAGAGAAGCTGCTCTATATATTGAAGGCCAGTTGGAGATGATAAAAGGCAGCGCTGGGTCCAAATTAAGGATTGAGATTGAGGAGATGGTCGTTAATGGATCTTTTAATATGTTGTTTTTGGGTCACAGTATATCGCTTGGTTACAGAAACCACACAAATATTGTAATGAGGATATCATCGGTGGAATCAGATGACACTGATCCGTCAGTTCTAGTAAACGGCCATTATGATAGTCCGCTGGGTTCCCCTGGTGCTGGTGACTGTGGCAGTTGCGTTGCAACGATGCTAGAACTAGCAAGACTTACCGTGGAATCTGACTGGGTCCCTCCTCGCCCCATAATTTTTCTTTTCAATGGCGCAGAAGAACTTTTTTTGCTGGGTGCTCATGGATTCATGAAGAGTAATAAGTGGCGGGACACAATTGGAGCAGTTATTAATGTGGAAGCATCTGGGACTGGTGGAATCGATTTAGTCTGTCAATCTGGGCCTGGATCCTGGCCTTCACGAGTCTATGCTCAATCAGCAATATATCCAATGGCACATAGTCTAGCGCAGGATGTTTTTCCAGTTATTCCAGGAGATACAGATTACCGGATCTTTTCTCAAGACTATGGTGACATTCCGGGTCTAGATATTATATTCCTTTTTGGTGGTTACTTTTACCATACCTCCTATGATACAATGGAGAGATTATTACCTGGCAGCATCCAAGCACGCGGAGACAATTTGTTTAGCGTAATTAAGGCATTTACAAATTCTTCTGAGTTACAAAGTTACTATGAACGAGCGGCTCGAGAAGAGACATTTAACGAAGAGGAACGAGCTGTTTTCTTTGATTACTTGTCATGGTTCATGGTATTTTATTCTAGGACAGTGGCTCAGGCCCTTCACAGTATTCCACTTCTTATCTTCCTTGCAATGCCGTTTTGTCTGTGGTTACAGCGATCGTGCACATCCTCATGGCTACTGATCTATCTTGATTTTATCAAAGGATTGTTGTTCCATGCATGTGGGATTGCACTTGCAATAATCTTTCCAATTATGGTTTCCATCATTAATTTAAAATTCTCCAGTCATGCAATGGCTTGGTTTTCTAATCCACAGTTGGCTTTTGCCATGTTTATTCCCTCCTCATTAATTGGCCTTTTGATTCCGAGAATTGGACTATGTGATGAAGCAAGGTTTTGGGGAGCATTTGGGTTTTATGCCATTTTAACGATGGCTTATCTTTTGGCTGGGTTGAGTGGTGGCTTCTTGACCTTTTTTGCATCCGCCTCTATGATTATTGCTTGGATATTTTATTCGTTAGCAATCAAATATTGGTGTAGAAAGTCACTCTGGTTGACAGCATATTATGTGATACCTTTACTTCCGTTCGTCGCATATTCAGTGTACTTTGGAGGGTTTCTTGCCCAATTTATAATCGAGAAGATGGGTATGATGGGCGCACTTCCACCCCCCTACGGCTATTTTGTACCTGATGTGGTAGTGGCAGCTATTTTTGGGGTTGTTACTGGGTGGTGCATTGGCCCTCTTATACCTGTTTGTGGTCAGTGGTTGGCCAGACCCACAATCCTCAAGCTTTTGCTGCATGTCACCCTTACTACACTTGCACTGTCGAGTCAATTCTTTCCTTATAGTATGGATGCACCCAAAAGGGTTGTATTTCAGCATACCTTACGGACTGAAGGTTCAAATAAAATTGTGGAGTCCAAATATGATTTTTCTGTGGTGGATTCCAATTCGTTGCATTTTCTTTTCAAACATTCACCCGAAGTGACAAGGAAATTGAATATTAGTTCAGAGTCACTTGAAACTGTAGACCTGTCATGGCGAGACACCTGGCTGGCACTTTTTCCAGTATCTTTTTTGGTGTCAAGAAGCATGAGGTTCCCGGCAGAAACCAATCATATTGCACAGCAAACCACAAGCTTCCCTCATTTGTTTATTCAGAAACCGCAAACAGTTTCCGAAGAAGGACGAAGGAGGGTCTACTTAGAGCTTTCACTGGGTTCGATAGAGGAGATTTGGGTGACTGTCATTAACGTAACAGGCCCTCTATCTAGCTGGTCGTTTGCAGACAACACGCTTCCAGCTCCTGAGACGGTAGATGGTGGCCCCCCCTCGTACATATGTAGACTGAGTGGAGTGGATAATGAGAATTGGAGATTCTGGTTGGAGGTGAGAGTCAAATTTTTCTTGTTTCGTCTTAGAATTGAGGGGCTTATATGGGGTATTTTATGGAATATGCAGGTGAGCAGTTGGGAAGAATTGAGGATCGATGTGGCGGTGCTGGACCAACAGGTGGGCGATGAAGTGAAGGCGTTGAAGAGCTTATTTCCGGCATGGGTTGATGTAGTTGCATACGCTAGCTTTATGTCCACTTTCACCACCTGA 2628 44.03 MVLGLSADDVSGYKLLACLMLLFTFMSNVVYNVLHLNSINPLGLNAPPNLFSEARALEHVRVLTKQIDGRQEGRPGLREAALYIEGQLEMIKGSAGSKLRIEIEEMVVNGSFNMLFLGHSISLGYRNHTNIVMRISSVESDDTDPSVLVNGHYDSPLGSPGAGDCGSCVATMLELARLTVESDWVPPRPIIFLFNGAEELFLLGAHGFMKSNKWRDTIGAVINVEASGTGGIDLVCQSGPGSWPSRVYAQSAIYPMAHSLAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLFGGYFYHTSYDTMERLLPGSIQARGDNLFSVIKAFTNSSELQSYYERAAREETFNEEERAVFFDYLSWFMVFYSRTVAQALHSIPLLIFLAMPFCLWLQRSCTSSWLLIYLDFIKGLLFHACGIALAIIFPIMVSIINLKFSSHAMAWFSNPQLAFAMFIPSSLIGLLIPRIGLCDEARFWGAFGFYAILTMAYLLAGLSGGFLTFFASASMIIAWIFYSLAIKYWCRKSLWLTAYYVIPLLPFVAYSVYFGGFLAQFIIEKMGMMGALPPPYGYFVPDVVVAAIFGVVTGWCIGPLIPVCGQWLARPTILKLLLHVTLTTLALSSQFFPYSMDAPKRVVFQHTLRTEGSNKIVESKYDFSVVDSNSLHFLFKHSPEVTRKLNISSESLETVDLSWRDTWLALFPVSFLVSRSMRFPAETNHIAQQTTSFPHLFIQKPQTVSEEGRRRVYLELSLGSIEEIWVTVINVTGPLSSWSFADNTLPAPETVDGGPPSYICRLSGVDNENWRFWLEVRVKFFLFRLRIEGLIWGILWNMQVSSWEELRIDVAVLDQQVGDEVKALKSLFPAWVDVVAYASFMSTFTT 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57792234 57799345 + Bda004523.2 Bda01g02181 2181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02181 875 PANTHER METALLOPEPTIDASE M28 FAMILY MEMBER 5 805 IPR045175 GO:0006508|GO:0008235
Bda01g02181 875 PANTHER METALLOPEPTIDASE M28 FAMILY MEMBER 810 873 IPR045175 GO:0006508|GO:0008235
Bda01g02181 875 Pfam Peptidase family M28 130 321 IPR007484 -
Bda01g02181 875 PANTHER BNAA07G25020D PROTEIN 5 805 - -
Bda01g02181 875 PANTHER BNAA07G25020D PROTEIN 810 873 - -
Bda01g02181 875 CDD M28_Fxna_like 51 365 - -
Bda01g02181 875 SUPERFAMILY Zn-dependent exopeptidases 43 330 - -
Bda01g02181 875 Gene3D Zn peptidases 48 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02181 Bda-Chr1:57792234 Bda14g00348 Bda-Chr14:2533217 1.82E-41 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02181 - - jre:109003163 1206.82