Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02201 ATGAGCATACAGGAGGCTCTCTCCGCGTCTGGGCTGAGCTCCGAGAAGCTCAGCCTACCTACTCTCCAGTCCAAGATGAAGTGTGACCCCGAAGGATATGAATCAGAACTTGGTCTTCTTTACAGCCAATTCAAATCCTCTGTGGAGCTTTGCCAACAACAAGCTGCTCAGAACTTCACATCCTTTGGTGGCGTTAGTAGCGATCCTACTGTTGCCAAAAGCCTTGGGGAAAAGGCTATGTTCTTAGCCCATGTAACTCCTTTCTATCCTCACCATCTCTCCGAGTTCCCCAAGCAACTCGCTGAATTGCTCCGCTCTTCCGCAAGATCACTGCCTTCAGCTCTGCGCTGTCACTTAGCGCAGTCTCTTATTCTTCTGATTAACAGACAGATGGTAGACATTGGAGAAAATTTGGCACTGTTCATGGAGCTGCAGACATTGGGTGATCAAAAATTAAGGAAGTTGGCATTCTCTCACATTATTCATAGCATCAAAAGAATGAATCAAAGGCACAAGAATGAAGCAAAAAATCGAATGCTTCAAAACATATTGTTTGCCATGCTACAGAAAGAGGATGAAGCATTAGCTAAGCGATCCCTTGTAACATTATGTGAGCTACATCGGAGGAAACTGTGGTTTGATGATCGAACTGCAAATGCAATTTGTACTTCTTGTTTTCATCCATCGACTAGGATCATGATTGCTACTCTGTCATTTCTTCTTGATTATGAGAAAATCGTAGATGCTGCTGATGATGATAGTGATGCATCGAGTAGTGAAGATGACTCAACTCCTCTAGTACCTCATGCAGTGCTTAGTAGAGAAGCTGTTTATAAGGCGCACCACAAAGGTACAGTTTCTAGCAAAAGGAAAAAGAAAGCGAAATTGCAACGTGTCATTCGTAGCATGAAAAAAAAGCAACGTTTGTCATCAGAGAGAAACACGTCAGATCATTATTCACCACTTAACCATCTGAAGGATGCACAGGGATTTGTGGAGAAACTATTCTCTCGACTTCAGACCTGCAGTGAACGGTTTGAGTTTCTCGTAGGATGTTCAGCTATTTGTACAGCAAACCAGTTTTTAGTTGGTTCTAACTATTTGTTACATTTTCCTCACTTCCTATTTCCTCATCAACGTGATGTCACAAGCTTACTTGCTGCAGCCGTTCAAACTTGCCATGATATGGTTCCTCCCGATGCAGTAGAGCCTCTTTTCAAACAAATTGTAAATCAATTTGTGCACGATCATTCTCGTCCAGAGGCCATTGCTGTTGGGCTTAATGTAATAAGGGAGATTTGTTTGCGTATGCCTCTGCTCATGACAGAAGATTTACTTCAAGATCTTGCTTTGTACAAAAAATCACATGAGAAGGCAGTTTCAGTGGCCGCACGATCTCTTATTGGTCTATTCAGAGAGGTTTGTCCATCACTTTTGGTGAAGAAAGACCGAGGAAGGCCTACTAACCCAACGGCAAGGCCGAAAGCATATGGGGAAGTCAGTGTAGTCAGCGATGTTCCTGGTGTTGAATTGTTGCAAGATGACAGTGACAAGACAGATGAAGATGATTTTGGATCTGGTAACGAGGAAAATGCCAGCGGAGATGAATGCACCCTACATGACAATTATCAAAGTGAAGATGATAAATCAGAGGAACATAATGCTATTGCTGAAGACAGAAGTACGGACGGCACTGATGACAATGAATATGATGGTGAGTTTGATGATGATAATGATGAAGAAGAAGATGTGAGTGAGGATGAAGCAGAGGAAGTTGAAAACGAAGAGAGCTATAATGATGACGGTGAAGAGGATTCTGAAACTGAGGGCTCTGAAATGGCAAATGAGAATGGTTACAGGGAGAGCATAACTGAAATAAAAGATTCTAAAGTGAGGAAGAGGAAGTTCCCTGATTTTAAGAAACAAATTATTGCTGCGGATTCGAGTCTTCAGGCTTTAAAAGGGTTGGCTAGAAGAATGCTTAAGCGGCCCTCGTCAGACGAAGGAGATGGTATTCTTTCTAATGAAGACTTTCGAAAGATAAAGGAACGAAAGGCAAAGGAAGAAGCAAAAATTGCCATGACTCAGCATGGTTTGCTTAGAAAAGGTTCAGATGCAAAGGCAACAGCTTTTAAGATTCCAAGTTCCGATCAACTGAGTATTAAGCGTGTAGATCCTGCCCAACTTGAAGTTCATGTTCGAAAGAAGCTAACAAAGGACGAAAGATTGGCATTAGTGAGAGCAGGTAGAGAAGAGAGAGGGAAGTACCAGGCTCGAGCTGCCGTAAAACAGAAGAAGACTGGAGGTATGAGCAACAGGCAGAAAGAGCACAAGAAGGCAATGCCACTCGCAGCAAAGAGATCGAAAATCTCAAAATCGCGGGTCCAGAAGCGGAAAAGAGAGCAGCGATCAGGCAAACACTTCCGGGGAAAGAAAGCCTGGAAATAG 2448 43.01 MSIQEALSASGLSSEKLSLPTLQSKMKCDPEGYESELGLLYSQFKSSVELCQQQAAQNFTSFGGVSSDPTVAKSLGEKAMFLAHVTPFYPHHLSEFPKQLAELLRSSARSLPSALRCHLAQSLILLINRQMVDIGENLALFMELQTLGDQKLRKLAFSHIIHSIKRMNQRHKNEAKNRMLQNILFAMLQKEDEALAKRSLVTLCELHRRKLWFDDRTANAICTSCFHPSTRIMIATLSFLLDYEKIVDAADDDSDASSSEDDSTPLVPHAVLSREAVYKAHHKGTVSSKRKKKAKLQRVIRSMKKKQRLSSERNTSDHYSPLNHLKDAQGFVEKLFSRLQTCSERFEFLVGCSAICTANQFLVGSNYLLHFPHFLFPHQRDVTSLLAAAVQTCHDMVPPDAVEPLFKQIVNQFVHDHSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLALYKKSHEKAVSVAARSLIGLFREVCPSLLVKKDRGRPTNPTARPKAYGEVSVVSDVPGVELLQDDSDKTDEDDFGSGNEENASGDECTLHDNYQSEDDKSEEHNAIAEDRSTDGTDDNEYDGEFDDDNDEEEDVSEDEAEEVENEESYNDDGEEDSETEGSEMANENGYRESITEIKDSKVRKRKFPDFKKQIIAADSSLQALKGLARRMLKRPSSDEGDGILSNEDFRKIKERKAKEEAKIAMTQHGLLRKGSDAKATAFKIPSSDQLSIKRVDPAQLEVHVRKKLTKDERLALVRAGREERGKYQARAAVKQKKTGGMSNRQKEHKKAMPLAAKRSKISKSRVQKRKREQRSGKHFRGKKAWK 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57908369 57913541 - Bda004541.1 Bda01g02201 2201

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02201 815 Pfam SDA1 441 812 IPR007949 -
Bda01g02201 815 MobiDBLite consensus disorder prediction 784 815 - -
Bda01g02201 815 MobiDBLite consensus disorder prediction 515 529 - -
Bda01g02201 815 MobiDBLite consensus disorder prediction 769 783 - -
Bda01g02201 815 MobiDBLite consensus disorder prediction 534 563 - -
Bda01g02201 815 Coils Coil 286 306 - -
Bda01g02201 815 PANTHER PROTEIN SDA1 HOMOLOG 15 815 - -
Bda01g02201 815 MobiDBLite consensus disorder prediction 280 319 - -
Bda01g02201 815 SUPERFAMILY ARM repeat 39 479 IPR016024 -
Bda01g02201 815 MobiDBLite consensus disorder prediction 283 304 - -
Bda01g02201 815 Pfam NUC130/3NT domain 81 132 IPR012977 -
Bda01g02201 815 MobiDBLite consensus disorder prediction 506 627 - -
Bda01g02201 815 MobiDBLite consensus disorder prediction 564 611 - -
Bda01g02201 815 PANTHER HSDA/SDA1-RELATED 15 815 IPR027312 GO:0000055|GO:0042273
Bda01g02201 815 MobiDBLite consensus disorder prediction 751 815 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02201 K14856 SDA1, SDAD1; protein SDA1 - zju:107428499 1040.41
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g596 Blo01g00379 . Bda01g02201 . Bpe13g00513 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0708 Cone12ag0686 . . . . . . . . . . Bma01g00031 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007839 1 3 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 1 2 1 1 1 1 1 1 35