Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02205 ATGAGCAGTAGCACGGAGGTTTCTATTTCGGTTCCGGATTGTCATTCTCCTTCGAGCCCTAAGACAGGCGGCCAAGCTTCTTCTTCTTGTTTGTTGAAGAGGAAAAGACCCCCCGTGATTGAGATCCCCAACATTTTGCGAGAAATTCGAGCGGATAATATCGCACCCAGTAGCAATGCCCTTTCCTTTTCTGGGAATGGAGTTGGGGTCTCGTCTGTTAAAGGCAAGAAAAAGTTCATGGAAGACGCGCACAAAATTGTTCCTTTCTCTAAGGCTCACTTAAATGAAGCCTTTTTTGGCGTTTATGATGGACACGGAGGCAGCAAGGCCGCCGAGTTTGTTGCTCAAAATTTGCACCGTAACATCCTGGAAATGATGGATCATAGTTGGGGATCCACGGAGAAAGAAGAGAGGATCAAATCTGGTTATTTGAAGACAGACCTCGACTTCTTGAATCTGGGTATTGGCAGTGGTGCGTGCTGCGTTACTGCTTTGATTCAAGGTCAAGATGTTATGATTTCAAACTTAGGAGACTGCAGAGCTGTTCTATCTAGAGGTGGAGTAGCTGAAGCAGTCACAAAAGACCACAGAGCGGAACGAGAGGACGAAAGGCAGAGAATAGAGAGCAAGGGTGGATATGTGGAGTTTCATAGGGGAGCATGGAGAGTTCATGGGGTGCTTTCTGTTTCAAGGAGCATTGGGGATGCCCATTTGAAGGACTGGGTTGTAGCTGAGCCTGATACAAAAATCTTGTCTTTCACTCCAGATATGGACTTTCTTGTCTTAGCTTCTGATGGATTGTGGGAAGAGGTCGGCAACCAAGAGGCCATTGATATTGTCAGCCGAGTCTGCTTGCGTGATAAGCAATCAGCACAAGCAGAAGGTCCCCACAAATGCCCGCCCGTCGATCCAAATCATGGCTACGTTAATGTAAGTCCCTCGTCAAAGCTACGCAGAGTCAGTTTAGTCAATAAACAAGCAATGAACCGCTCTTCACTACACAAAAAGACAACTACTTGTTACAGAGATGGCGAAGAGGATGATGACTTCAGCTGCGAAGACCAGAGTCCTGCTTCAAAGTCAAGAAGAATATCATTGGGGAAGCGAGTGAACGTAAAGACGGAGTCTCCGTCTAAGGAGAACAGGTCCCCCTCAAATGGCCTCGTGGCAGCTTGTAAGGAGCTTGTCGGCCTCGCTCTTTCCAGGGGCAGTTTGGATGATATCACTGTTATGATAATTGATTTGAATCATTTTTTTAGATCCAAAACCTGA 1272 46.54 MSSSTEVSISVPDCHSPSSPKTGGQASSSCLLKRKRPPVIEIPNILREIRADNIAPSSNALSFSGNGVGVSSVKGKKKFMEDAHKIVPFSKAHLNEAFFGVYDGHGGSKAAEFVAQNLHRNILEMMDHSWGSTEKEERIKSGYLKTDLDFLNLGIGSGACCVTALIQGQDVMISNLGDCRAVLSRGGVAEAVTKDHRAEREDERQRIESKGGYVEFHRGAWRVHGVLSVSRSIGDAHLKDWVVAEPDTKILSFTPDMDFLVLASDGLWEEVGNQEAIDIVSRVCLRDKQSAQAEGPHKCPPVDPNHGYVNVSPSSKLRRVSLVNKQAMNRSSLHKKTTTCYRDGEEDDDFSCEDQSPASKSRRISLGKRVNVKTESPSKENRSPSNGLVAACKELVGLALSRGSLDDITVMIIDLNHFFRSKT 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57925610 57927689 - Bda004545.1 Bda01g02205 2205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02205 423 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Bda01g02205 423 MobiDBLite consensus disorder prediction 1 30 - -
Bda01g02205 423 CDD PP2Cc 66 282 IPR001932 -
Bda01g02205 423 SUPERFAMILY PP2C-like 65 417 IPR036457 -
Bda01g02205 423 MobiDBLite consensus disorder prediction 344 363 - -
Bda01g02205 423 ProSiteProfiles PPM-type phosphatase domain profile. 67 415 IPR001932 -
Bda01g02205 423 Gene3D - 62 422 IPR036457 -
Bda01g02205 423 PANTHER PROTEIN PHOSPHATASE 2C 14-RELATED 22 419 - -
Bda01g02205 423 SMART PP2C_4 52 413 IPR001932 -
Bda01g02205 423 Pfam Protein phosphatase 2C 67 283 IPR001932 -
Bda01g02205 423 PANTHER PROTEIN PHOSPHATASE 2C 22 419 IPR015655 GO:0004722|GO:0006470
Bda01g02205 423 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02205 Bda-Chr1:57925610 Bda14g00243 Bda-Chr14:1703696 4.82E-71 dispersed
Bda01g02205 Bda-Chr1:57925610 Bda13g01574 Bda-Chr13:39243086 5.20E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02205 - K17506 hbr:110651854 496.893