Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02213 ATGAAGAGGGGATCCATCTTCTTACTTTTCATTTGCTCTGTATTATTAATGGAGCTGACAGAAGGTGATCCAAGAGCGCAGACAGTTCAGCTTATTTGCGGGCATCAACCTGAGCACAACAGTACATTATACGTCCCGAATTTCGTCGCAACAATGGAAAGAATCAGCGATCAAATGCGAACATCCGGCTACGGAGTTGCCGTCACTGGTTTCGGGCCCGACACAAACTACGGCCTCGCTCAATGCTACGGCGATCTCTCTTTACTCGACTGCGTTTGGTGCTACGCCGAGGCTCGGACCGTCCTCCCTCAGTGCTTCCCCTACAACGGCGGTCGAATTTACCTCGACGGCTGCTTCATGAGGGCAGAGAATTACAGCTTCATCCACGAATTTTCCGGACCGGAGGACCGATCCGTTTGTGGGAACGGGACTCGCACGAGTTCCTTGTATCGAGACTCAGCGAGGAGGGCTGTTATGCGGGCAGTTGGGGCAGCGCCGAACAACACGATGTTGTTCGCGAGAGATGAGCTGGCGCTGCCTGGGACGGTTAACGAATCGGTTTATGTGCTCGCTAATTGCTGGAGAAGTTTGAATTCAAGCTCTTGCAAAGCGTGCTTGGAGAACGCCTCGTCGTCGGTATTGGGCTGTTTGCCGGCGTCGGAAGGTCGAGCGCTCTTTACCGGCTGCTTCATCAGATACTCCGATCGTAATTTCCTCAACATTGAAGCTTCTAGTAGCAGATCGAGAGGTATAACAACCGCCATTGTCGTGTCAGTTGTAAGCTCTGCGGTCGTGATTATAGTTGGAGTAATAATTGGAGCTTACGTGTGGAAGCAGAGATACATCCAAAAGAAAAGAAGAGGTTCCGATAATGCCGAAAAGTTGGTTAAAACCCTCCATGACAGTAGCTTGAACTTCGAATACTCGACCCTGGAGAAGGCCACAGGATCTTTTAGCAACGATAACAAGCTCGGACAAGGAGGATTCGGCACTGTTTATAAGGGGGTTCTGCCTGATGGACGAGAGATTGCAGTAAAGAGGCTGTACTTCAACAACAAACACAGGGCGGCAGATTTTTACAACGAAGTGAACATAATTAGCAGTGCAGAACACAAGAATCTAGTTAGACTATTAGGCTGTAGCTGTTCCGGCCCTGAAAGTCTTCTCGTCTATGAATTCTTGCCCAACCAGAGTCTCGATCGCTTCATTTTTGTTCCTAATTCCGGGAAATCGTTGAATTGGGAGAAGCGATACGACATTGTAATCGGAACAGCCGAAGGTCTAGTTTACTTACACGAGGACTGCACGATCAAGATCATTCACAGAGATATCAAGGCTAGTAATATTCTTCTGGACATCAAATTTCGGCCAAAAATTGCTGATTTTGGCTTAGCCAGGTCCTTCCAAGAAGACAAGAGCCATATCAGTACAGCAATAGCTGGAACCTTAGGATATATGGCTCCGGAATACTTAGCTCACGGCCAGTTGACGGAGAAGGCCGATGTGTACAGCTTTGGTGTGCTCATTCTAGAGATCATTACAGGGAGACAGAATAATAGGAGTAAAACTACTGAATACTCCGACAGCTTGGCCACAATTACATGGAGGCACTTTCAAGCGGGGAGAGTGGAGGAGCTGATAGACCCTACCATAAAGAGCCAAAATCAGTACAATGCCAACGCTAAGAATGAGATAAGGAGAGTGGTGCATATAGGACTTTTATGCACCCAAGAGGTTCCGTCCTTAAGACCCGCGATGTCGAAAGTATTGCAAATGCTAACTAAGAAGGAAGAGGATCTTCCTCCGCCCACAAATCCGCCTTTCATGGACGAGCAAACTATGCAATTCAACGACTCATGCGAAGTTCCTTTGCATATGCTCAATACCGATAATTCTTCTTCTATTGCTACCTACTCCCACAGCTCTTTCTATCCCAGATGA 1941 47.71 MKRGSIFLLFICSVLLMELTEGDPRAQTVQLICGHQPEHNSTLYVPNFVATMERISDQMRTSGYGVAVTGFGPDTNYGLAQCYGDLSLLDCVWCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFIHEFSGPEDRSVCGNGTRTSSLYRDSARRAVMRAVGAAPNNTMLFARDELALPGTVNESVYVLANCWRSLNSSSCKACLENASSSVLGCLPASEGRALFTGCFIRYSDRNFLNIEASSSRSRGITTAIVVSVVSSAVVIIVGVIIGAYVWKQRYIQKKRRGSDNAEKLVKTLHDSSLNFEYSTLEKATGSFSNDNKLGQGGFGTVYKGVLPDGREIAVKRLYFNNKHRAADFYNEVNIISSAEHKNLVRLLGCSCSGPESLLVYEFLPNQSLDRFIFVPNSGKSLNWEKRYDIVIGTAEGLVYLHEDCTIKIIHRDIKASNILLDIKFRPKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLILEIITGRQNNRSKTTEYSDSLATITWRHFQAGRVEELIDPTIKSQNQYNANAKNEIRRVVHIGLLCTQEVPSLRPAMSKVLQMLTKKEEDLPPPTNPPFMDEQTMQFNDSCEVPLHMLNTDNSSSIATYSHSSFYPR 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57988957 57991455 + Bda004553.1 Bda01g02213 2213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02213 646 SMART serkin_6 318 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02213 646 Gene3D - 137 238 IPR038408 -
Bda01g02213 646 Gene3D - 26 127 IPR038408 -
Bda01g02213 646 ProSiteProfiles Gnk2-homologous domain profile. 26 127 IPR002902 -
Bda01g02213 646 Gene3D Transferase(Phosphotransferase) domain 1 394 602 - -
Bda01g02213 646 CDD STKc_IRAK 324 595 - -
Bda01g02213 646 Gene3D Phosphorylase Kinase; domain 1 278 393 - -
Bda01g02213 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 6 625 - -
Bda01g02213 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 625 - -
Bda01g02213 646 Pfam Protein tyrosine and serine/threonine kinase 321 593 IPR001245 GO:0004672|GO:0006468
Bda01g02213 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Bda01g02213 646 ProSiteProfiles Protein kinase domain profile. 318 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02213 646 ProSiteProfiles Gnk2-homologous domain profile. 132 238 IPR002902 -
Bda01g02213 646 SUPERFAMILY Protein kinase-like (PK-like) 302 618 IPR011009 -
Bda01g02213 646 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Bda01g02213 646 Pfam Salt stress response/antifungal 41 125 IPR002902 -
Bda01g02213 646 Pfam Salt stress response/antifungal 147 235 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01289 Bda-Chr1:48337235 Bda01g02213 Bda-Chr1:57988957 7.70E-168 dispersed
Bda01g02213 Bda-Chr1:57988957 Bda15g00043 Bda-Chr15:1916344 6.34E-83 dispersed
Bda13g01627 Bda-Chr13:39741485 Bda01g02213 Bda-Chr1:57988957 1.43E-77 dispersed
Bda02g00255 Bda-Chr2:40167149 Bda01g02213 Bda-Chr1:57988957 4.06E-99 transposed
Bda01g02213 Bda-Chr1:57988957 Bda14g00806 Bda-Chr14:6205846 1.51E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69477 PF07714 PK_Tyr_Ser-Thr 2.10E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02213 - - vvi:100251695 952.584