Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02214 | ATGAGAAGTCATCACATTGCTGTGGCTTTCGCAGCTAGTTTCAGTGCTGCCTTTGTTTTCATAGTGCTTATTGCGCTTCTGGTTTGGTGGCGATACAGACATAACCAGCAAATTTTCTTTGATGTTAATGATCAATACGACCCAGAGGTATGCTTAGGCCACCTGCGAAGATACACGTTTAAGGAGCTCCGAGCAGCCACTGATCATTTTAACCCAAAGAATATTTTAGGGAGAGGAGGATTTGGAATTGTGTACAAGGGAAGCTTGAATGACGGAACTCTTGTCGCTGTTAAACGATTGAAGGACTACAATACGGCTGGTGGGGAAATACAGTTTCAGACCGAAGTAGAGATGATAAGTTTAGCAGTTCATAGAAATCTTCTCAGATTATGCGGATTTTGTTCGAATGAGAATGAACGCCTTCTTGTTTATCCCTACATGCCTAACGGAAGCGTTGCCTCCCGATTGAGAGATCGTGTTCATGGTTGTCCTGCCCTGGACTGGGTGATACGCAAGAGGATAGCTTTAGGCACTGCGAGGGGGTTGGTCTATTTACACGAGCAATGTGACCCGAAAATTATCCACCGTGATGTAAAAGCAGCTAACATATTGCTTGATGAAGACTTTGAGGCTGTGGTCGGAGATTTTGGGTTGGCCAAGCTTTTAGATCACAGAGATTCTCATGTAACCACTGCAGTTCGAGGAACTGTTGGCCACATTGCCCCAGAGTACTTATCGACCGGCCAATCATCGGAAAAAACTGATGTCTTTGGCTTCGGAATATTACTTCTCGAGCTCATAACTGGTCAAAAAGCTTTGGATTTTGGACGAGCAGCTAATCAGAAGGGCATAATGCTCGACTGGGTGAGAAAGCTCCATCAAGAGGGAAAGCTAAATCTGATGGTGGACAAGGATCTGAAGAACAACTTTGACAGAATCGAACTGGAAGAGATGGTTCAAGTGGCATTGTTGTGCACCCAGTTTAATCCTCTGCACCGGCCAAAAATGTCGGAAGTATTAAAGATGTTAGAAGGAGATGGGTTGGCTGAGAAATGGGAGGCATCTCAGCAGGTGGAGACTCCTCGATTCCGATCCAACGAACACCCTCAGAGGTATTCAGATTACATCGAAGAATCGTCGTTGGTAGTAGAGGCAATGGAGCTCTCGGGTCCGAGGTGA | 1179 | 45.55 | MRSHHIAVAFAASFSAAFVFIVLIALLVWWRYRHNQQIFFDVNDQYDPEVCLGHLRRYTFKELRAATDHFNPKNILGRGGFGIVYKGSLNDGTLVAVKRLKDYNTAGGEIQFQTEVEMISLAVHRNLLRLCGFCSNENERLLVYPYMPNGSVASRLRDRVHGCPALDWVIRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRAANQKGIMLDWVRKLHQEGKLNLMVDKDLKNNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEKWEASQQVETPRFRSNEHPQRYSDYIEESSLVVEAMELSGPR | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57998963 | 58000470 | - | Bda004554.1 | Bda01g02214 | 2214 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02214 | 392 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 363 | - | - | |
Bda01g02214 | 392 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 146 | - | - | |
Bda01g02214 | 392 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Bda01g02214 | 392 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 344 | IPR011009 | - | |
Bda01g02214 | 392 | Pfam | Protein kinase domain | 72 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g02214 | 392 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 98 | IPR017441 | GO:0005524 | |
Bda01g02214 | 392 | SMART | serkin_6 | 70 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g02214 | 392 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 2 | 392 | - | - | |
Bda01g02214 | 392 | PANTHER | PROTEIN NSP-INTERACTING KINASE 3 | 2 | 392 | - | - | |
Bda01g02214 | 392 | ProSiteProfiles | Protein kinase domain profile. | 70 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02214 | Bda-Chr1:57998963 | Bda03g00411 | Bda-Chr3:3543626 | 3.27E-175 | dispersed | |
Bda07g01052 | Bda-Chr7:12392324 | Bda01g02214 | Bda-Chr1:57998963 | 0 | transposed | |
Bda01g02214 | Bda-Chr1:57998963 | Bda11g01277 | Bda-Chr11:13373417 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69478 | PF00069 | Pkinase | 2.40E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02214 | - | - | fve:101308277 | 719.924 |