Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02225 ATGGCGGCCAGGAGATTCTCCAAGCTTTTTTCTCGCTCCTTTGCTTCTCCTTCTTTCTTCATGAGCAAAGGACCAGGTAACCCAATCGGAAAATACAGCACGGCGGCAGCAATTGAAGAACCTATCAATCCTTCTATCAACGTCAATTACACTCAGCTTTTGATCAATGGCCAATTTGTCGATTCAGCTTCCGGAAAAACTTTTCCGACATTGGACCCGAGGACCGGCGAGGTAATCGCTCATGTTGCTGAGGGAGATGCGGAAGACATTGATCGAGCGGTTGCAGCCGCTCGCCGAGCATTTGACGAGGGACCATGGCCAAAGATGACTGCTTATGAACGATCTCGGATTATCCTGCGGTTCGCCGATTTAATGGAGAAGCACAACGATGAAATCGCGGCTCTTGAAACTTGGGATAACGGGAAGCCATATGAACAGTCTGCGAAAGCTGAAATTCCTATGCTAATTCGTTTGTTCCGCTACTATGGAGGTTGGGCGGATAAGATCCACGGCCTTACAGTTCAGGCCGACGGCCCTCACCATGTTCAAACCTTGCATGAACCGATCGGAGTTGTGGGGCAGATTATTCCATGGAATTTTCCTCTTCTCATGTACGCATGGAAGGTTGGACCGGCACTGGCCTGTGGAAACACCATTGTTCTTAAAACTGCTGAGCAGACTCCATTGTCTGCCCTGTTCGTAACGAAGCTATTACACGAGGCCGGACTTCCTGATGGTGTGATTAATATTGTTTCTGGTTTTGGACCTACTGCCGGTGCTGCTCTTGCCAGTCATATGGATGTCGACAAGCTTGCTTTCACTGGTTCGACCGAAACTGGGAAAATCGTACTTGGATTGTCAGCAACAAGCAATCTTAAGCCGGTAACTTTGGAACTTGGCGGAAAATCCCCTTTCATCGTCTGTGAGGATGCTGACGTGGATATGGCTGTTGAGCTCGCTCATTTTGCTCTATTCTTTAACCAAGGGCAATGCTGCTGTGCTGGTTCTCGTACTTTCGTACACGAAAGTGTATATGATGAGTTCTTGGAGAAAGCAAAGGAGCGGGCTATGAAACGAACTGTTGGTGATCCGTTCAAGGGGGGTATTGAGCAAGGACCTCAAATTGATTCCGAACAGTTTGAAAAGATTCTGAAATACATAAAATCTGGAGTTGAAAGTGGAGCCAATCTCGAAACTGGAGGAGAGAGGCTTGGCTCAAAGGGTTATTATATCAAACCCACTGTTTTCTCAGATGTTCAGGATGATATGTTGATTGCAAAAGATGAGATCTTTGGTCCAGTTCAGTCAATTTTGAAGTTCAAAAATCTCGATGAGGTTATTAAGCGGGCAAACGCGAGTCGTTTTGGGCTGGCAGCCGGAGTATTCACAAAGAACATTGATACGGCTAACTTGAAGAATCCTGCTTGGCTTTAG 1434 46.79 MAARRFSKLFSRSFASPSFFMSKGPGNPIGKYSTAAAIEEPINPSINVNYTQLLINGQFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDIDRAVAAARRAFDEGPWPKMTAYERSRIILRFADLMEKHNDEIAALETWDNGKPYEQSAKAEIPMLIRLFRYYGGWADKIHGLTVQADGPHHVQTLHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVINIVSGFGPTAGAALASHMDVDKLAFTGSTETGKIVLGLSATSNLKPVTLELGGKSPFIVCEDADVDMAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLEKAKERAMKRTVGDPFKGGIEQGPQIDSEQFEKILKYIKSGVESGANLETGGERLGSKGYYIKPTVFSDVQDDMLIAKDEIFGPVQSILKFKNLDEVIKRANASRFGLAAGVFTKNIDTANLKNPAWL 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58076734 58079834 - Bda004565.1 Bda01g02225 2225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02225 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 470 IPR016163 GO:0016620
Bda01g02225 477 SUPERFAMILY ALDH-like 47 470 IPR016161 GO:0016491
Bda01g02225 477 Pfam Aldehyde dehydrogenase family 59 470 IPR015590 GO:0016491
Bda01g02225 477 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 23 471 - -
Bda01g02225 477 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 471 - -
Bda01g02225 477 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Bda01g02225 477 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Bda01g02225 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 300 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02225 Bda-Chr1:58076734 Bda11g00121 Bda-Chr11:1644231 9.60E-173 dispersed
Bda01g02225 Bda-Chr1:58076734 Bda11g01261 Bda-Chr11:13221454 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02225 K00128 - zju:107428629 788.104