Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02246 ATGTCAATAAATAATAATCTGGTGGATGTGTTGCAAGATGAAAAGTGGGACAGTATCGCGTGGAAGAAGCTGCAGGTTGGAGACATTATCAGGGTTAAGCAAGATGGTTTTTTTCCTGCTGATTTACTTTTTCTTGCTGGTTCAAATGCAGATGGCATCTGCTACATAGAGACTGCTAATTTAGATGGTGAGACAAATTTGAAGATCAGGAAGGCATTAGAAAAGACTTGGGATTACTTGACTCCTGATAAAGCATCTGAATTCAAAGGTGAGATACAATGTGAGCAGCCTAATAATTCATTGTACACTTTCACTGGGAATCTTATTTTTCAGAAACAAACTTTACCTCTTAGCCCAAACCAGCTTTTATTGCGAGGGTGCAGTTTAAGGAACACTGAATACATTGTTGGGGCTGTTATTTTTACAGGCCATGAGACGAAGGTTATGATGAATGCAATGAATGTTCCTTCTAAACGAAGTACTTTGGAGAGGAAACTTGACAAACTTATTCTAGCACTTTTCAGTACTCTGTTTTTCATGTGTCTGATTGGGGCCATTGGCAGTGGTATATTCATAGATCGCAAGTACTATTACTTAAATCTTGATAAAGGACGAGAAGATCAATTCAACCCTAACAACCGTTTTGTGGTTGCCATTCTAACTATGTTTACCCTGATTACTCTATACTCAACTATAATTCCCATTTCACTTTATGTTTCTATTGAGATGGTCAAATTCATTCAGTCAACTCAATTTATCAACAAGGACTTGAATATGTACCATGCTGAAAGCAACACCTCTGCACTGGCTAGGACTTCCAATTTAAACGAGGAACTTGGACAGGTGGAATACATCTTTTCTGATAAAACTGGAACTCTAACAAGAAACTTAATGGAGTTTTTCAAGTGTTCAATTGGAGGAGAGGTATATGGTACTGGGGTCACTGAAATAGAAAGAGGAATTACCCAGCGAAATGGCATGAAAATTGACGAAGTACCGAAATCAGCCAATGCAGTTCTTGAGAAAGGCTTTAATTTTGATGACGGTCGAATAATGCGTGGAGCATGGAGAAATGAGCCTAATCCAGATCTATGCAAGGAATTTTTCAGATGCCTTGCTATATGTCATACCGTGCTCCCTGAGGGTGATGATTCCCCAGAAAAGATCACATATCAAGCAGCTTCACCAGATGAGGCTGCTTTGGTAACTGCGGCAAAAAACTTTGGCTTCTTTTTTTATAGGCGTACGCCTACTATGATTTATGTTCGCGAAGCTCATGTTGAGAAGATGGGTAAAGTCCAAGATGTGGCTTATGAGATTCTCAATGTCCTTGAGTTCAATAGTACAAGGAAGCGCCAGTCAGTTGTATGCCGATATCCAGATGGCAGGCTTGTCTTGTATTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCTAGTGGAAATGACGACTTAAAGAAAGTATCTAGGGAACGCCTAGAACAATTTGGTTCTTCTGGGTTGCGAACTCTTTGCCTTGCTTATAAGAATTTGAGTCTTGATATGTATGAAAGCTGGAATGAAAAATTTATCCAGGCCAAATCGTCTCTACGAGATCGTGAAAAGAAGTTGGACGAGGTGGCGGAACTCATAGAGAAGGATCTTAGTTTGATTGGTTGTACTGCCATTGAAGACAAGCTTCAAGAAGGAGTACCAAACTGTATAGAGACACTTTCGAGGGCTGGTATCAAGATTTGGGTGCTCACGGGGGATAAGATTGAGACTGCAATAAATATAGCTTATGCCTGCAATTTAATTAACAATGATATGAAGCAATTTGTCATCAGTTCAGAAACGGATGCGATTAGAGAAGTTGAAGACAGAGGTGACCAAGTAGAAATTGCTCGTTTTACCAGAGAAGAAGTTAAAAAACAGCTGAAGAAGTGTCTTGAGGAAGCACAACAATACTTGTACACAGCCTCTGGCCCAAAATTAGCACTTGTAATTGATGGGAAGTGTTTGATGTATGCTTTGGATCCAAGTTTGCGAGTGATGCTACTTAATTTGAGCTTGAATTGTAGTTCAGTTGTTTGTTGCCGTGTTTCCCCTCTGCAGAAAGCACAGGTTACCAGTATGGTCAAGAAAGGTGCGAAGAAAATAACACTTGGTATTGGCGATGGTGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGGATAAGTGGGCAGGAAGGAATGCAAGCGGTGATGGCGAGCGATTTTGCGATTGCCCAGTTTCGGTTTCTTACTGATTTATTACTTGTGCATGGACGATGGTCATATCTTAGAATATGCAAGGTCGTTACATACTTTTTTTACAAGAATCTTACATTCACTTTGACTCAATTTTGGTTCACGTTTCAAACTGGATTTTCTGGGCAAAGATTTTATGATGATTGGTTTCAGTCATTATATAATGTGATATTTACAGCATTACCTGTAATAATTGTTGGACTTTTTGACAAGGATGTTAGTGCTTCCCTTTCCAAGAAGTATCCAGAGCTCTATGGTGAGGGGATAAGAAATGCTTTTTTCAAATGGAGGGTCGTGGCAATTTGGGCTTTTTTTGCCTTCTACCAATCTCTGGTCTTCTATCACTTTGTGGCTGCTTCTAGTAGTGGTGGTCAAAACTCATCTGGCAGAATATTTGGTCTTTGGGATGTTAGCACAATGGCATTCACCTGCGTTGTAGTGACTGTCAACTTGCGTCTGCTTTTGATGTGCAATTCAATTACTCGGTGGCACTATATAAGTGTTGGTGGAAGCATTTTAGCATGGTTCATATTCATATTCTTATATTCTGGTTTTATGACTCCATATGATAGGCAGGAGAATGTGTATTTTGTCATATACGTCTTGATGAGTACTTTCTACTTCTATCTCGCTATTCTTCTCATTCCTATAGCTGCACTACTTTGCGACTTTTTTTACCAAGGGATCCAAAGATGGTTTTTCCCCTATGATTATCAGATTGTCCAAGAAATTCACAGACATGAGCCTGATGGTAGAGGCACAGCAGGTCTGCTGGAGATTGATAATCATCTTACAGCAGCTGAGGCAAGAAGCTATGCCATCTCCCAACTTCCAAGAGAAATTTCAAAGCACACAGGCTTTGCTTTTGATTCACCTGGCTATGAATCATTCTTTGCTGCTCAGCTTGGTGTTTATGCGCCACAGAAGGCGTGGGATGTTGCCCGGAGAGCCAGCATGAGGTCTCGTCCAAAGATTTTGCCAGAGAAGTAA 3273 40.3 MSINNNLVDVLQDEKWDSIAWKKLQVGDIIRVKQDGFFPADLLFLAGSNADGICYIETANLDGETNLKIRKALEKTWDYLTPDKASEFKGEIQCEQPNNSLYTFTGNLIFQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFSTLFFMCLIGAIGSGIFIDRKYYYLNLDKGREDQFNPNNRFVVAILTMFTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLNMYHAESNTSALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGITQRNGMKIDEVPKSANAVLEKGFNFDDGRIMRGAWRNEPNPDLCKEFFRCLAICHTVLPEGDDSPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVREAHVEKMGKVQDVAYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLASGNDDLKKVSRERLEQFGSSGLRTLCLAYKNLSLDMYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLSLIGCTAIEDKLQEGVPNCIETLSRAGIKIWVLTGDKIETAINIAYACNLINNDMKQFVISSETDAIREVEDRGDQVEIARFTREEVKKQLKKCLEEAQQYLYTASGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCSSVVCCRVSPLQKAQVTSMVKKGAKKITLGIGDGANDVSMIQAAHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYGEGIRNAFFKWRVVAIWAFFAFYQSLVFYHFVAASSSGGQNSSGRIFGLWDVSTMAFTCVVVTVNLRLLLMCNSITRWHYISVGGSILAWFIFIFLYSGFMTPYDRQENVYFVIYVLMSTFYFYLAILLIPIAALLCDFFYQGIQRWFFPYDYQIVQEIHRHEPDGRGTAGLLEIDNHLTAAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMRSRPKILPEK 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58250772 58259506 - Bda004591.1 Bda01g02246 2246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02246 1090 Gene3D - 396 552 IPR023299 GO:0000166
Bda01g02246 1090 PRINTS P-type cation-transporting ATPase superfamily signature 718 737 - -
Bda01g02246 1090 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Bda01g02246 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 691 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g02246 1090 Pfam Phospholipid-translocating P-type ATPase C-terminal 746 996 IPR032630 -
Bda01g02246 1090 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1086 - -
Bda01g02246 1090 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 2 1004 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bda01g02246 1090 SUPERFAMILY Calcium ATPase, transmembrane domain M 71 996 IPR023298 -
Bda01g02246 1090 Gene3D - 1 153 - -
Bda01g02246 1090 SUPERFAMILY Calcium ATPase, transduction domain A 5 149 IPR008250 -
Bda01g02246 1090 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 293 556 IPR023299 GO:0000166
Bda01g02246 1090 SUPERFAMILY HAD-like 281 774 IPR036412 -
Bda01g02246 1090 Pfam Cation transport ATPase (P-type) 384 479 - -
Bda01g02246 1090 SFLD C1.7: P-type atpase like 268 769 - -
Bda01g02246 1090 Pfam E1-E2 ATPase 6 241 - -
Bda01g02246 1090 ProSitePatterns E1-E2 ATPases phosphorylation site. 288 294 IPR018303 -
Bda01g02246 1090 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1086 - -
Bda01g02246 1090 Gene3D - 553 758 IPR023214 -
Bda01g02246 1090 CDD P-type_ATPase_APLT_Dnf-like 3 878 - -
Bda01g02246 1090 SFLD p-type atpase 268 769 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02246 Bda-Chr1:58250772 Bda11g01755 Bda-Chr11:52303369 0 dispersed
Bda01g02246 Bda-Chr1:58250772 Bda11g01244 Bda-Chr11:12954048 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02246 K14802 - csv:101207069 1928.68