Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02251 ATGGAGAAAGGAGCTGGAGATGGTAAAGCGGAGAATTGGGAGATAGGAGAATCAAATGAAAAGAAGAAGAGGAAGAAGAATAGGGGAGACGTTGATGGTGAAGAAGAGGTAGCTGGGTGTTGGATTGCTCTGAAAACTTTGGGAAATTGCATTTCTTCAAGATCCAAAATTGATAGCTCAGTTCGTGGGACTGGGACCACTGAAAATAAATCAGCACCTGATACAAGCAGAGATCAACCGGCAATTGCTGGGGTATCTTCAACGACAACTAGCAATAGCAATGGAGAGGGCAGTTCATCCAATTCCAGGCTGGATGAGGAACTTAAAATTTTTCCCGGTCTCAGAAAATTTGCATTCAATGATCTTAAGTTGGCAACGAGGAATTTCAGACCCGAGAGCCTTCTTGGCGAAGGTGGTTTTGGCTGTGTCTTCAAGGGGTGGATCGAAGAAAATGGAACTGCTCCAGTAAAGCCCGGTACAGGTCTTACTGTTGCAGTCAAGACGCTCAACCTTGATGGCCTTCAGGGTCACAAAGAATGGATGGCTGAAGTAAATTTTCTCAGTGACCTTGTGCATACTAACTTGGTGAAACTTATCGGGTACTGCTACGAAGAAGATCAGAGGTTGCTAGTGTATGAATTTATGCCGCGAGGAAGCTTGGAAAATCACATTTTCCGAAGATCTTTACCTCTTCCATGGTTTATGAGGATCAAAATTGCGTTAGGTGCCGCAAAGGGTCTTGCTTTTCTCCACGAGGAAGCGAAAAGGCCTGTGATATACCGTGATTTTAAGACATCAAACATTCTATTGGATGCAGACTACAATGCCAAGCTTTCTGATTTTGGACTCGCCAAAGATGGTCCAGAGGGAGACAAAACCCACGTCTCCACCCGAGTCATGGGAACATATGGTTATGCAGCTCCTGAATATGTAATGACTGGACATCTCACTTCTAAGAGTGACGTGTACAGTTTTGGCGTAGTTCTTCTTGAGATATTAACTGGAAGAAGATCTATGGACAAAAACAGACCAAATGGAGAGCACAACCTTGTCGAGTGGGCTCGACCATATCTTGTAGAGAGAAAACGGTTCTACCGGTTGATTGATCCTCGACTTGAAGGTCACTTTTCAATAAAGGGTGCTCAGAGAGCAACTCAATTGGCTGCCCATTGCCTTAACAGAGACCCAAAAACCAGGCCTTTAATGAGTGAAGTCGTTGAGGCGTTAACGCCTCTGCCGAACCTCAAGGACATGGCAAGCTCTTCATACAATTTTCAGAACATTACAAGCTCAAATGTTAAGAATGGTGTGGTTATTCAAGGAGGATCGCGTTCAAGGAATGGACAGCTACTTAGAAGCCCTTCTGTTGTAAATGGTTCTCATCTTTCTCCTTATCACTATAATCACCCCTATCCTTCTCCTAAACCAGTGGCTAAATCATAG 1443 44.14 MEKGAGDGKAENWEIGESNEKKKRKKNRGDVDGEEEVAGCWIALKTLGNCISSRSKIDSSVRGTGTTENKSAPDTSRDQPAIAGVSSTTTSNSNGEGSSSNSRLDEELKIFPGLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNLDGLQGHKEWMAEVNFLSDLVHTNLVKLIGYCYEEDQRLLVYEFMPRGSLENHIFRRSLPLPWFMRIKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKNRPNGEHNLVEWARPYLVERKRFYRLIDPRLEGHFSIKGAQRATQLAAHCLNRDPKTRPLMSEVVEALTPLPNLKDMASSSYNFQNITSSNVKNGVVIQGGSRSRNGQLLRSPSVVNGSHLSPYHYNHPYPSPKPVAKS 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58286972 58290746 + Bda004596.1 Bda01g02251 2251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02251 480 MobiDBLite consensus disorder prediction 56 104 - -
Bda01g02251 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Bda01g02251 480 SUPERFAMILY Protein kinase-like (PK-like) 107 409 IPR011009 -
Bda01g02251 480 MobiDBLite consensus disorder prediction 461 480 - -
Bda01g02251 480 Gene3D Transferase(Phosphotransferase) domain 1 215 434 - -
Bda01g02251 480 ProSiteProfiles Protein kinase domain profile. 129 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02251 480 Pfam Protein kinase domain 132 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02251 480 Gene3D Phosphorylase Kinase; domain 1 113 214 - -
Bda01g02251 480 CDD STKc_IRAK 135 412 - -
Bda01g02251 480 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Bda01g02251 480 PANTHER OS01G0588500 PROTEIN-RELATED 60 470 - -
Bda01g02251 480 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 60 470 - -
Bda01g02251 480 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02251 Bda11g01235 CCT
Bda01g02251 Bda11g01235 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02251 Bda-Chr1:58286972 Bda01g02279 Bda-Chr1:59176807 2.39E-10 dispersed
Bda01g01952 Bda-Chr1:55934194 Bda01g02251 Bda-Chr1:58286972 1.83E-173 transposed
Bda01g02251 Bda-Chr1:58286972 Bda11g01229 Bda-Chr11:12805584 5.22E-144 wgd
Bda01g02251 Bda-Chr1:58286972 Bda11g01235 Bda-Chr11:12856575 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69479 PF00069 Pkinase 5.10E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02251 - - jre:108980075 737.258