Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02255 | AGAGAGAGAGAGATGGACGCCCCCTTATTGAAATCAGAACTTTGCCGGAGTGGAAGTAACTATATTGCGGCGGATAGTGAGCCGGGGGCTCACCGACGAGTAAAGAGACGTCGAAGAGATTCCTCTGCGATCGCAATCGGGTGTGGTAATCGACCTTTTGATCAGCTGCCTCAGAACCCATCTGAGCTTGATCAATCTACCACCATTGCTGCCCCAAAAAGAAGCTCGAGATATCGCGGAGTCAGCAGGCATAGATGGACAGGGAGATACGAAGCTCATTTATGGGATAAAGGTTCTTGGAATCCAACTCAAAAGAAGAAAGGAAAGCAAGGAGCTTACGATGAAGAAGAATCCGCAGCAAGAGCATATGATCTAGCCGCTCTCAAGTATTGGGGAGCATCCACTTTCACCAACTTTCCTATTTCTGATTACGAGAAAGAAATCGAGATTATGGTGAGTGTATCGAAAGAAGAATACTTAGCCACTTTAAGAAGAAGGAGTAGTGGTTTCTCCAGAGGTGTATCCAAGTATAGAGGAGTAGCAAGGCACCATCACAATGGGAGATGGGAGGCAAGAATAGGAAGAGTGTTTGGAAACAAGTATCTGTATCTCGGCACTTACAGTACTCAAGAGGAAGCTGCTCGAGCTTACGATATAGCTGCAATTGAGTACAGAGGAATCAATGCAGTGACCAACTTTGATTTAAGCACATACATAAGATGGCTTAAACCCGAGCCTAATCTTCTTACGCCATGTTTGAAGTCATCACCAGCTAAACAGTCTCAGCTCCCCATAGCTTCTTCCTCTTCCATAGCTTCAACAGTCATGGAAGACACCCACTTGTCAATTTTTCCAGAAAAGCAAGAAACTGTTCATTCGATAACCAGAAATTCCCGGACTTCGCCTCCGTCTCCGACGGCTCTAGGACTCCTCCTAAAATCTTCAGTGTTCAGAGATCTGGTGGAGAAGAATTTGAACGGAGGAGTTGCAGAGAATGACACAGAAATTAATACGAAACGAAATAATATTCCTTATTTGTGCTCTTCCAGTGGCGGTTTAGTGTCTGCTCTGAGATCTGGTGAGGAGGAGAACAATTTAAGTTCTAAAATGGACAACTCTCTTTGGATTATGTCTGCTGCGTTTCATTCCAACTAA | 1155 | 44.59 | REREMDAPLLKSELCRSGSNYIAADSEPGAHRRVKRRRRDSSAIAIGCGNRPFDQLPQNPSELDQSTTIAAPKRSSRYRGVSRHRWTGRYEAHLWDKGSWNPTQKKKGKQGAYDEEESAARAYDLAALKYWGASTFTNFPISDYEKEIEIMVSVSKEEYLATLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPEPNLLTPCLKSSPAKQSQLPIASSSSIASTVMEDTHLSIFPEKQETVHSITRNSRTSPPSPTALGLLLKSSVFRDLVEKNLNGGVAENDTEINTKRNNIPYLCSSSGGLVSALRSGEEENNLSSKMDNSLWIMSAAFHSN | 384 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 58302655 | 58304715 | + | Bda004599.1 | Bda01g02255 | 2255 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02255 | 384 | ProSiteProfiles | AP2/ERF domain profile. | 77 | 140 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | CDD | AP2 | 175 | 236 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | PRINTS | Ethylene responsive element binding protein signature | 216 | 236 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | PRINTS | Ethylene responsive element binding protein signature | 78 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 28 | 342 | - | - | |
Bda01g02255 | 384 | Pfam | AP2 domain | 175 | 226 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | Pfam | AP2 domain | 76 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 28 | 342 | - | - | |
Bda01g02255 | 384 | SMART | rav1_2 | 176 | 240 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | SMART | rav1_2 | 77 | 146 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | Gene3D | AP2/ERF domain | 76 | 142 | IPR036955 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | Gene3D | AP2/ERF domain | 175 | 236 | IPR036955 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | MobiDBLite | consensus disorder prediction | 21 | 66 | - | - | |
Bda01g02255 | 384 | SUPERFAMILY | DNA-binding domain | 175 | 236 | IPR016177 | GO:0003677 | |
Bda01g02255 | 384 | SUPERFAMILY | DNA-binding domain | 76 | 142 | IPR016177 | GO:0003677 | |
Bda01g02255 | 384 | ProSiteProfiles | AP2/ERF domain profile. | 176 | 234 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g02255 | 384 | CDD | AP2 | 76 | 142 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02255 | Bda-Chr1:58302655 | Bda01g02282 | Bda-Chr1:59204511 | 1.40E-08 | dispersed | |
Bda03g01557 | Bda-Chr3:54748972 | Bda01g02255 | Bda-Chr1:58302655 | 8.44E-07 | dispersed | |
Bda01g02255 | Bda-Chr1:58302655 | Bda13g01680 | Bda-Chr13:40175782 | 7.38E-08 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15520 | PF00847 | AP2 | 3.00E-09 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02255 | - | - | dzi:111317631 | 407.142 |