Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02293 ATGGAGAGAATGGACGAGGATGGGGTGCATAATTGTGTAATCAAGCTGGTTAGTAATAATAAATCCTCAAAGCATAGGGAAAAGGTATATATTGGGTGTGGAGCTGGATTTGGTGGTGACAGGCCAATGGGAGCTCTGAAATTGCTTCAGAGAGTCAAAGACCTAAACTATCTTGTGCTTGAATGCATGGCATCTGGTGGCGATGGCTATGATACGCGGATTTCGGAGTGGATGGCAACGCTACTTCCTCTGGCAGTGGAGAGAGGTGTCTGCATAATCACGAACTTGGGTGCAATGGATCCACCTGGTGCACAGGATAAAGTTTTAGAAATAGCCGACAGCTTGGGCCTTAGAATTTCCGTAGCTGTGGCTCATGAGGTTTCTACAAAAGATAGCACATATCTAGGAGCTAACCTAGCACAAGGATTACTCGCTGGTCACCTCCTAGAGTGTCAGCTTCTATATGAGGTTGGTGATCCAGGTCTTTATATCACCCCTGATCTGGTAATTGACTTACTGGACGTTACGTTTTACCCTTTGTCCGACTTTAAGGTACTATGTACCGGTTCTAAGGCATCTTCTGATGTTAGGTCTTGGATGGAAGAAGTATTTATGGCCGTCCATGATATTAGGCTGCGCATGGATGGACTTTTTCCACAGAAGGCACAGGCAGTCCATTTTACGAGAGAGTTTATGGCTCTATATACTAATGGACCGGCTGGTGGCGGCGGCACTGGGCACAAGAAAGAAGTTGTTCTTGACAAACAGTTGAAACTCTTTTTCAATTGTCAGGTCACAAGGGAACACGTTTTCTGGCGTACTGGGGTAAAGTCCATCAACACAAACGAATCCGGAAGCAAAGAAAAAGCACTTGGAGACTCAGAGAAAATGAACTATTTGCATGAACATATATTCCAACCTGCGATCGACAAGTCTCCTCTACCCTCGGGTCGTAAAATTGCTCTCTATAATATAGCCCATAGCCGAGCGGAGATAAAGGAAACGACCTTAAATTTCTCAATCATTCCACATAATACCAACAGAGAGAGCTCATTTGACGAGCATGTTAGCGTGGAAATATACGATGTTACAAGGACGCCGAGCAAACTCTCCTCATTATTCAGTGGAACTCAAGACAAATGTTCAACCTGCGTGACTCTGGAGGGAGAATGTTACACCAAGACATGCTTCAGATGTGCTCATGGTGGGTGTCCATTGACAAATTCATCCTACGCTGCTCTTGATGGAGTTCTCTACTGCAAACACCACTTTGCTCAGCTGTTTAAAGAGGAACTTCAGAAAGAAGTGGACAGACTTAATGAGGTTGCAGAAAAAATGCAACTGAATGCTTTGAAGGCTGAGGAGGATGTGACTAACATAATGCATTTAGCTGAGCAAGCTGTTGCTGTGAATGAGGAAGAAGCTTCCCTTTTTGACATGCTGTGGCTACTGCTTGCTAGTGTAATATTTGTGCCTCTATTTCAGAGGATTCCTGGAGGCAGCCCTGTTCTTGGTTACTTAGCTGCTGGAATCTTGATCGGGCCTTATGGTCTTTCCATAATTCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTATTTCTACTGTTCAACATTGGCCTTGAGCTATCAGTGGAAAGGTTGAGTTCTATGAAGAAATATGTTTTTGGGTTGGGCTCTGCTCAGGTTTTGGTTACGGCTGTGGTGGTTGGCTTGGTTGCTCATGTGTTGCAGGAACGAGGTGAGAGCACGTCACGGCATGGACGCGCTACATTTCTGTCCTATTGTTCCAGGTGA 1806 44.85 MERMDEDGVHNCVIKLVSNNKSSKHREKVYIGCGAGFGGDRPMGALKLLQRVKDLNYLVLECMASGGDGYDTRISEWMATLLPLAVERGVCIITNLGAMDPPGAQDKVLEIADSLGLRISVAVAHEVSTKDSTYLGANLAQGLLAGHLLECQLLYEVGDPGLYITPDLVIDLLDVTFYPLSDFKVLCTGSKASSDVRSWMEEVFMAVHDIRLRMDGLFPQKAQAVHFTREFMALYTNGPAGGGGTGHKKEVVLDKQLKLFFNCQVTREHVFWRTGVKSINTNESGSKEKALGDSEKMNYLHEHIFQPAIDKSPLPSGRKIALYNIAHSRAEIKETTLNFSIIPHNTNRESSFDEHVSVEIYDVTRTPSKLSSLFSGTQDKCSTCVTLEGECYTKTCFRCAHGGCPLTNSSYAALDGVLYCKHHFAQLFKEELQKEVDRLNEVAEKMQLNALKAEEDVTNIMHLAEQAVAVNEEEASLFDMLWLLLASVIFVPLFQRIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHVLQERGESTSRHGRATFLSYCSR 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 59663877 59677087 - Bda004685.1 Bda01g02293 2293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02293 601 Coils Coil 425 456 - -
Bda01g02293 601 Gene3D Cysteine Rich Protein 377 474 - -
Bda01g02293 601 Gene3D - 475 597 IPR038770 -
Bda01g02293 601 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 398 431 - -
Bda01g02293 601 Pfam Sodium/hydrogen exchanger family 482 579 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda01g02293 601 Pfam Acyclic terpene utilisation family protein AtuA 31 123 IPR010839 -
Bda01g02293 601 Pfam Acyclic terpene utilisation family protein AtuA 151 193 IPR010839 -
Bda01g02293 601 PANTHER PROPIONYL-COA CARBOXYLASE 1 132 - -
Bda01g02293 601 PANTHER PROPIONYL-COA CARBOXYLASE 205 347 - -
Bda01g02293 601 PANTHER PROPIONYL-COA CARBOXYLASE 152 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02293 Bda-Chr1:59663877 Bda11g00260 Bda-Chr11:3048957 2.21E-74 dispersed
Bda13g01606 Bda-Chr13:39592533 Bda01g02293 Bda-Chr1:59663877 1.60E-07 dispersed
Bda15g00485 Bda-Chr15:8010253 Bda01g02293 Bda-Chr1:59663877 1.29E-13 dispersed
Bda01g02293 Bda-Chr1:59663877 Bda01g02295 Bda-Chr1:59684004 3.78E-75 proximal
Bda01g02293 Bda-Chr1:59663877 Bda01g02294 Bda-Chr1:59680800 5.45E-13 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15523 PF00999 Na_H_Exchanger 1.20E-16 CL0064 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02293 - - atr:18423071 217.624