Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00013 | ATGACATGTGCAGCATGTGTGAACTCTGTTGAAGGAATTTTGAGAAATCTTCCTGGTGTTAAAAAGGCAGTGGTAGCTTTAGCGACTTCTTTAGGGGAAGTTGAGTACGATCCGACTGTAATTAGTAAAGATGATATTGTGGAGGCAATAGAAGACGCTGGCTTTGAGGCTTCACTTGTACGCAGCAGCGAGCAGGATAAACTAATGCTGGGGGTTTCTGGTGTATTTTGTGAGATAGATGCACAATTTTTGGAAGGCATTCTCATCAACCTGAATGGGGTGAGACAATTTCGTTTTGACAGGATATCAAGAGAATTGGAAGTTTTTTTTGACCCCGAGGTTGTCAATTCTAGATCCTTAGTGGATGAGATTGTGGGAGGAAGCAATGGGAAGTTTATATTACATGTCTTAAGCCCCTATAGCAGAATGACTACCAAAGCCGTCGCAGAAACCTCTACTATGTTTCGCCTATTCACATCCAGTTTGTTTCTTAGTATTCCAGTCTTTTTCATACGGGTAATTTGTCCGCACATTCCTCTGTTGTACTCCTTGATACTCTGGAGATGTGGACCTTTCCTTATGGGAGATTGGTTGAAGTGGGCTCTGGTGAGTGTAGTTCAATTTGTGATTGGAAAGCGATTTTACGTAGCAGCTTTTAGAGCTCTTCGAAATGGTTCAACTAACATGGATGTATTAGTCGCCTTGGGTACTTCAGCCTCTTACTTCTACTCTGTTTGTGCACTTCTATATGGAGCAGCTACTGGGTTTTGGTCTCCCACATACTTTGAAACAAGTTCCATGCTAATTACATTTGTATTATTGGGAAAGTATTTGGAGTGTCTTGCTAAGGGGAAAACATCAGATGCCATCAAGAAGCTTGTAGAACTTGCCCCTGCAACTGCTTTATTGGTCGTGAAAGATAAAGATGGGAAATTGGTTGAAGAAAGGTTAATAGATGCTTTGCTTATTCAGCCTGGTGACACATTGAAAGTTCTTCCTGGTGCCAAAATTCCAGCTGATGGTGTGGTTGTCTGGGGATCGAGTTATGTTAATGAGAGCATGGTAACGGGTGAATCTGTACCTATTTTAAAGGAGCTCTACTCTCCAGTTGTTGGAGGTACAATTAATTTGCATGGTGCTCTTAATATAGAAGCAAAGAAAGTCGGGTCTGATACAGTTTTGAAGCCAGATCATTAG | 1197 | 41.52 | MTCAACVNSVEGILRNLPGVKKAVVALATSLGEVEYDPTVISKDDIVEAIEDAGFEASLVRSSEQDKLMLGVSGVFCEIDAQFLEGILINLNGVRQFRFDRISRELEVFFDPEVVNSRSLVDEIVGGSNGKFILHVLSPYSRMTTKAVAETSTMFRLFTSSLFLSIPVFFIRVICPHIPLLYSLILWRCGPFLMGDWLKWALVSVVQFVIGKRFYVAAFRALRNGSTNMDVLVALGTSASYFYSVCALLYGAATGFWSPTYFETSSMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKDGKLVEERLIDALLIQPGDTLKVLPGAKIPADGVVVWGSSYVNESMVTGESVPILKELYSPVVGGTINLHGALNIEAKKVGSDTVLKPDH | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 857422 | 859182 | + | Bda014242.1 | Bda02g00013 | 2308 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00013 | 398 | Gene3D | - | 283 | 396 | - | - | |
Bda02g00013 | 398 | PRINTS | Copper-transporting ATPase 1 signature | 158 | 179 | - | - | |
Bda02g00013 | 398 | PRINTS | Copper-transporting ATPase 1 signature | 19 | 42 | - | - | |
Bda02g00013 | 398 | PRINTS | Copper-transporting ATPase 1 signature | 212 | 237 | - | - | |
Bda02g00013 | 398 | PRINTS | Copper-transporting ATPase 1 signature | 48 | 68 | - | - | |
Bda02g00013 | 398 | SUPERFAMILY | Calcium ATPase, transduction domain A | 316 | 394 | IPR008250 | - | |
Bda02g00013 | 398 | SUPERFAMILY | HMA, heavy metal-associated domain | 1 | 63 | IPR036163 | GO:0046872 | |
Bda02g00013 | 398 | PANTHER | HEAVY METAL P-TYPE ATPASE | 1 | 394 | - | - | |
Bda02g00013 | 398 | ProSiteProfiles | Heavy-metal-associated domain profile. | 67 | 124 | IPR006121 | GO:0046872 | |
Bda02g00013 | 398 | Pfam | E1-E2 ATPase | 296 | 394 | - | - | |
Bda02g00013 | 398 | Pfam | Heavy-metal-associated domain | 1 | 56 | IPR006121 | GO:0046872 | |
Bda02g00013 | 398 | Gene3D | - | 1 | 60 | - | - | |
Bda02g00013 | 398 | PANTHER | ATP7, ISOFORM B | 1 | 394 | - | - | |
Bda02g00013 | 398 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 59 | IPR006121 | GO:0046872 | |
Bda02g00013 | 398 | SUPERFAMILY | HMA, heavy metal-associated domain | 65 | 124 | IPR036163 | GO:0046872 | |
Bda02g00013 | 398 | CDD | HMA | 1 | 58 | IPR006121 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00013 | Bda-Chr2:857422 | Bda02g00638 | Bda-Chr2:47308779 | 2.21E-92 | dispersed | |
Bda02g00013 | Bda-Chr2:857422 | Bda09g00789 | Bda-Chr9:14748283 | 3.98E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00013 | K17686 | - | pop:7461971 | 659.448 |