Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00030 ATGGCCGGAATCAAGTTATTTGGGAAGATGATCATTCTGCAGAATAAGAAAGAGAATGACGAGGAAACAACAGCTGATCCGACTGAGGAGAAGATGCCGGAAAAGATGATCCCATGTCCGAGATGCAAGAGCGATGAGACTAAATTTTGTTACTTCAACAACTACAACGTTAACCAGCCAAGACATTTCTGCAAAGCTTGTCAGAGGTATTGGACAGCCGGGGGTGCCCTCCGCAACATCCCTATTGGCGCTGGTCGCCGGGAGAACAAGCCACTTTGTGCCAACGTGAACCGGTTTCCTAAGAGTTATCTCCGTGGGGCGGCAGATTGGCCTTTTTCGACCTCACAAGAAGATTTCTGGAAAGATTTGCCGGCGAAGCGCCGGAGAGTTGGTCAATTTAGTCAAAGCTTTTGA 414 48.31 MAGIKLFGKMIILQNKKENDEETTADPTEEKMPEKMIPCPRCKSDETKFCYFNNYNVNQPRHFCKACQRYWTAGGALRNIPIGAGRRENKPLCANVNRFPKSYLRGAADWPFSTSQEDFWKDLPAKRRRVGQFSQSF 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1393842 1394255 - Bda014259.1 Bda02g00030 2325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00030 137 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Bda02g00030 137 Pfam Dof domain, zinc finger 35 90 IPR003851 GO:0003677|GO:0006355
Bda02g00030 137 PANTHER CYCLIC DOF FACTOR 2 2 99 IPR045174 GO:0003700|GO:0006355
Bda02g00030 137 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Bda02g00030 137 PANTHER DOF ZINC FINGER PROTEIN DOF1.5 2 99 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00030 Bda07g00980 CCT
Bda02g00030 Bda09g00803 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00030 Bda-Chr2:1393842 Bda09g00805 Bda-Chr9:15566524 2.92E-70 dispersed
Bda02g00030 Bda-Chr2:1393842 Bda07g00980 Bda-Chr7:11642620 2.12E-53 wgd
Bda02g00030 Bda-Chr2:1393842 Bda09g00802 Bda-Chr9:15503489 9.79E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15526 PF02701 zf-Dof 5.70E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00030 - - zju:107410557 160.999