Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00033 ATGGCTCATGTCAAGCGGGAGATTTCGATTCTCCGACGTGTTCGCCACCCTAATATAGTTCAACTTATCGAAGTTATGGCGACCAAGGCTAAGATCTACTTTGTCATGGAGTATGTTCGTGGCGGAGAGCTTTTCAAAAAGGTCGCCAAAGGTCGGCTAATAGAAGCTGTTGCTCGAAAATATTTTCAGCAATTGATCTCCGCCGTAGGATTCTGCCACGCTCGCGGTGTTTTTCACCGGGATCTCAAACCGGAAAATCTTTTGCTCGACGAGAATGGTGATCTCAAAGTTTCAGATTTTGGGTTAAGCGCCGTCTCCGATCAGATTCGGCAGGACGGTTTGTTTCACACGTTTTGTGGAACTCCGGCGTATGTTGCGCCGGAGGTTTTGGCAAGAAAAGGGTACGAAGCTGCAAAGGTCGATATCTGGTCTTGTGGGGTTATTCTTTTTGTTCTTATGGCTGGCTATTTACCATTTCACGATCAAAACGTATTGGCAATGTACAAGAAAATTTATAAGGGTGACTTTCGGAGTCCGAGATGGTTCTCGCCAGACCTAATTCAGCTCCTTTCGTGTCTTCTGGATACCAATCCGAAGACCCGAATCACCATTCCTGAAATCATGGAGAACCCATGGTTCAAGAAAGGGTTTAAGCATATCAAATTCTATATTGAGGATGATAAGCTTTGTAATGTTGTTGATGATATTGAAGATGTCGATTCACTTTCTGAGCACTCAATGTCCGAATCAGATTCTGAAATGGTGTCTCGGAGGAGGATTACTTCGTTACCTAGACCAGCGAGTTTGAACGCATTCGATATTATTTCTCCTAGTTTTAATCTTTCAGGATTGTTCGAAGATGGCGGAGAAGAGGTGAGATTTATATCTAATGCCCCCGTTTCGCAGATCATATCAAAAATTGAGGAAATTGCTCAGTTGAAGAGCTTCACTGTGAGGAAGAAGGACTGCAGAGTGAGCTTGGAGGGATCTAGAGATGGCGTAAAAGGTCCATTGACAATAGCAGCCGAGATATTTGAATTAACCCCATCCTTAGTCATGGTGGAAGTTAAAAAGAAAGCCGGAGATAAAGCAGAATATGAACACTTCTTTAACAGCGAATTGAAACCCGGATTGCAGAGTTTGATGCTGGACGTGAAGGAATCTTCTGCTTCTTCAAACATACCTTCAGATACTGAATAG 1200 43.42 MAHVKREISILRRVRHPNIVQLIEVMATKAKIYFVMEYVRGGELFKKVAKGRLIEAVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNVLAMYKKIYKGDFRSPRWFSPDLIQLLSCLLDTNPKTRITIPEIMENPWFKKGFKHIKFYIEDDKLCNVVDDIEDVDSLSEHSMSESDSEMVSRRRITSLPRPASLNAFDIISPSFNLSGLFEDGGEEVRFISNAPVSQIISKIEEIAQLKSFTVRKKDCRVSLEGSRDGVKGPLTIAAEIFELTPSLVMVEVKKKAGDKAEYEHFFNSELKPGLQSLMLDVKESSASSNIPSDTE 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1652112 1653311 - Bda014266.1 Bda02g00033 2328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00033 399 CDD CIPK_C 270 379 - -
Bda02g00033 399 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00033 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Bda02g00033 399 Gene3D Transferase(Phosphotransferase) domain 1 1 266 - -
Bda02g00033 399 Pfam NAF domain 266 320 IPR004041 GO:0007165
Bda02g00033 399 SUPERFAMILY Protein kinase-like (PK-like) 3 263 IPR011009 -
Bda02g00033 399 Pfam Protein kinase domain 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00033 399 PANTHER - 1 392 - -
Bda02g00033 399 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 1 392 - -
Bda02g00033 399 SMART serkin_6 2 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00033 399 ProSiteProfiles NAF domain profile. 264 286 IPR018451 GO:0007165
Bda02g00033 399 Gene3D Kinase associated domain 1, KA1 267 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00868 Bda-Chr1:41457114 Bda02g00033 Bda-Chr2:1652112 0 dispersed
Bda02g00033 Bda-Chr2:1652112 Bda14g01118 Bda-Chr14:10175510 1.99E-149 dispersed
Bda02g00033 Bda-Chr2:1652112 Bda02g00137 Bda-Chr2:19715219 1.23E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69481 PF00069 Pkinase 3.00E-63 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00033 - - csv:101214053 661.373