Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00033 | ATGGCTCATGTCAAGCGGGAGATTTCGATTCTCCGACGTGTTCGCCACCCTAATATAGTTCAACTTATCGAAGTTATGGCGACCAAGGCTAAGATCTACTTTGTCATGGAGTATGTTCGTGGCGGAGAGCTTTTCAAAAAGGTCGCCAAAGGTCGGCTAATAGAAGCTGTTGCTCGAAAATATTTTCAGCAATTGATCTCCGCCGTAGGATTCTGCCACGCTCGCGGTGTTTTTCACCGGGATCTCAAACCGGAAAATCTTTTGCTCGACGAGAATGGTGATCTCAAAGTTTCAGATTTTGGGTTAAGCGCCGTCTCCGATCAGATTCGGCAGGACGGTTTGTTTCACACGTTTTGTGGAACTCCGGCGTATGTTGCGCCGGAGGTTTTGGCAAGAAAAGGGTACGAAGCTGCAAAGGTCGATATCTGGTCTTGTGGGGTTATTCTTTTTGTTCTTATGGCTGGCTATTTACCATTTCACGATCAAAACGTATTGGCAATGTACAAGAAAATTTATAAGGGTGACTTTCGGAGTCCGAGATGGTTCTCGCCAGACCTAATTCAGCTCCTTTCGTGTCTTCTGGATACCAATCCGAAGACCCGAATCACCATTCCTGAAATCATGGAGAACCCATGGTTCAAGAAAGGGTTTAAGCATATCAAATTCTATATTGAGGATGATAAGCTTTGTAATGTTGTTGATGATATTGAAGATGTCGATTCACTTTCTGAGCACTCAATGTCCGAATCAGATTCTGAAATGGTGTCTCGGAGGAGGATTACTTCGTTACCTAGACCAGCGAGTTTGAACGCATTCGATATTATTTCTCCTAGTTTTAATCTTTCAGGATTGTTCGAAGATGGCGGAGAAGAGGTGAGATTTATATCTAATGCCCCCGTTTCGCAGATCATATCAAAAATTGAGGAAATTGCTCAGTTGAAGAGCTTCACTGTGAGGAAGAAGGACTGCAGAGTGAGCTTGGAGGGATCTAGAGATGGCGTAAAAGGTCCATTGACAATAGCAGCCGAGATATTTGAATTAACCCCATCCTTAGTCATGGTGGAAGTTAAAAAGAAAGCCGGAGATAAAGCAGAATATGAACACTTCTTTAACAGCGAATTGAAACCCGGATTGCAGAGTTTGATGCTGGACGTGAAGGAATCTTCTGCTTCTTCAAACATACCTTCAGATACTGAATAG | 1200 | 43.42 | MAHVKREISILRRVRHPNIVQLIEVMATKAKIYFVMEYVRGGELFKKVAKGRLIEAVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNVLAMYKKIYKGDFRSPRWFSPDLIQLLSCLLDTNPKTRITIPEIMENPWFKKGFKHIKFYIEDDKLCNVVDDIEDVDSLSEHSMSESDSEMVSRRRITSLPRPASLNAFDIISPSFNLSGLFEDGGEEVRFISNAPVSQIISKIEEIAQLKSFTVRKKDCRVSLEGSRDGVKGPLTIAAEIFELTPSLVMVEVKKKAGDKAEYEHFFNSELKPGLQSLMLDVKESSASSNIPSDTE | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1652112 | 1653311 | - | Bda014266.1 | Bda02g00033 | 2328 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00033 | 399 | CDD | CIPK_C | 270 | 379 | - | - | |
Bda02g00033 | 399 | ProSiteProfiles | Protein kinase domain profile. | 1 | 213 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00033 | 399 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 77 | 89 | IPR008271 | GO:0004672|GO:0006468 | |
Bda02g00033 | 399 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 266 | - | - | |
Bda02g00033 | 399 | Pfam | NAF domain | 266 | 320 | IPR004041 | GO:0007165 | |
Bda02g00033 | 399 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 263 | IPR011009 | - | |
Bda02g00033 | 399 | Pfam | Protein kinase domain | 3 | 213 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00033 | 399 | PANTHER | - | 1 | 392 | - | - | |
Bda02g00033 | 399 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 | 1 | 392 | - | - | |
Bda02g00033 | 399 | SMART | serkin_6 | 2 | 213 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00033 | 399 | ProSiteProfiles | NAF domain profile. | 264 | 286 | IPR018451 | GO:0007165 | |
Bda02g00033 | 399 | Gene3D | Kinase associated domain 1, KA1 | 267 | 383 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00868 | Bda-Chr1:41457114 | Bda02g00033 | Bda-Chr2:1652112 | 0 | dispersed | |
Bda02g00033 | Bda-Chr2:1652112 | Bda14g01118 | Bda-Chr14:10175510 | 1.99E-149 | dispersed | |
Bda02g00033 | Bda-Chr2:1652112 | Bda02g00137 | Bda-Chr2:19715219 | 1.23E-139 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69481 | PF00069 | Pkinase | 3.00E-63 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00033 | - | - | csv:101214053 | 661.373 |