Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00037 ATGGAGGAGGAAAAGATGAAGAGAGAGATCGCCATTGGCAGTAACAATAGCAGTAGCTTTCCACCCTCTGATTCATGGTCATGGAGAAAGTACGGTCAGAAACCCATCAAAGGATCACCTTATCCCAGAGCCTATTACAGATGTAGCAGCTCAAAAGGATGCCCTGCCAGAAAACAAGTAGAAAGAAGCAGAGCTGATCCCACTACGCTTCTCGTCACCTACTGCTGCGACCACAATCATCCGGCCAATGCTTCAAGAAATAAGAATCAACCCAATAATTCCGCCGCAGCAAAACAGAGACAACCCATAATTGTCCAAGATAACCGGAAATTGGAAAGTGAGCCGGAGCCAGATGAGAAATTCAGCGATGACTTCGGTTGGCTCAGCGACATGGAGACTACTCCCTCGACGCTGCTGGAGAGTCCATTTTATGTTAAGACAACCACCGTAGTTGACGGAGCTTTATTTCAGATGAGGGAGGAGGACGAGTCTCTCTTTGCCGATCTTGACGAGTTGCCGGAATGTTCCCTCGTATTCCGGCGAGGACGGCCTGTGCAAATCAACGACGAACAGCTTCGGCAGTTTACTTCTCCGTGCTGTGGGACCACCAGCTGA 615 49.27 MEEEKMKREIAIGSNNSSSFPPSDSWSWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERSRADPTTLLVTYCCDHNHPANASRNKNQPNNSAAAKQRQPIIVQDNRKLESEPEPDEKFSDDFGWLSDMETTPSTLLESPFYVKTTTVVDGALFQMREEDESLFADLDELPECSLVFRRGRPVQINDEQLRQFTSPCCGTTS 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1806140 1806875 - Bda014274.1 Bda02g00037 2332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00037 204 PANTHER OS01G0750100 PROTEIN 10 188 - -
Bda02g00037 204 MobiDBLite consensus disorder prediction 11 26 - -
Bda02g00037 204 SUPERFAMILY WRKY DNA-binding domain 20 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00037 204 MobiDBLite consensus disorder prediction 82 127 - -
Bda02g00037 204 Gene3D WRKY domain 8 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00037 204 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 188 IPR044810 GO:0003700
Bda02g00037 204 Pfam WRKY DNA -binding domain 24 81 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00037 204 MobiDBLite consensus disorder prediction 1 39 - -
Bda02g00037 204 ProSiteProfiles WRKY domain profile. 23 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00037 204 MobiDBLite consensus disorder prediction 105 126 - -
Bda02g00037 204 MobiDBLite consensus disorder prediction 82 101 - -
Bda02g00037 204 SMART WRKY_cls 22 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00037 Bda-Chr2:1806140 Bda14g00771 Bda-Chr14:5895742 4.91E-56 dispersed
Bda02g00037 Bda-Chr2:1806140 Bda10g00663 Bda-Chr10:40760190 3.36E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15527 PF03106 WRKY 1.40E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00037 - - vvi:100244564 219.164