Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00045 ATGGCGGAAAATTCAGACCATGCAGTAGTTTTGAACGTGAAAGACGACGTAGAGAAGGCCGACTCTCCATCCTCCTCGATTTTATCTGTACCTTTCATCCAGAAGATAATTGCGGAGGTGTTGGGGACGTATTTTCTGATATTTGCAGGGTGTTCGTCTGTGGCGGTGAATCTGAATGAGGACAAAGTGGTGACTCTTCCTGGGATTTCGATCGTTTGGGGGCTTGTCGTGATGGTGATGATCTACTCACTCGGCCATATCTCCGGCGCTCATTTCAACCCCGCTGTCACCATTGCCTTCGCTTCCACTAAAAGATTTCCATGGATACAGGTAGGGCCATATGTATTAGCTCAGATCCTCGGATCAACCCTAGCAAGTGGGACCATTAAACTAATATTCAGCGACAAACCAGACCATTTTGTGGGAACAGCTCCTTCTGGATCAAATATGCAGTCACTCATCATTGAATTCATAATAACTTTTTACCTCATGTTCGTGGTCTCCGGTGTCGCCACCGACAATCGAGCGATCGGGGAGCTTGCTGGTATTGCAGTAGGGTCAACGGTGCTTCTGAACGTGTTGTTTGCAGGGCCAATTACAGGAGCATCGATGAATCCAGCAAGAAGCTTAGGGCCAGCTCTGGTCTACAGCCGTTACAGAGGATTATGGATATACATAGTGGGTCCAATTCTTGGGGCAATATCCGGTGCATGGGTCTACAACATCATCAGATTCACTGACAAACCCTTGAGAGAAATCACCAAATCTTCCTCTTTCCTCAAAAGGGCTGCATCCAAAAATTGA 804 47.01 MAENSDHAVVLNVKDDVEKADSPSSSILSVPFIQKIIAEVLGTYFLIFAGCSSVAVNLNEDKVVTLPGISIVWGLVVMVMIYSLGHISGAHFNPAVTIAFASTKRFPWIQVGPYVLAQILGSTLASGTIKLIFSDKPDHFVGTAPSGSNMQSLIIEFIITFYLMFVVSGVATDNRAIGELAGIAVGSTVLLNVLFAGPITGASMNPARSLGPALVYSRYRGLWIYIVGPILGAISGAWVYNIIRFTDKPLREITKSSSFLKRAASKN 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2083483 2084804 + Bda014293.2 Bda02g00045 2340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00045 267 CDD MIP 34 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PANTHER AQUAPORIN NIP2-1 5 262 IPR034294 -
Bda02g00045 267 PANTHER AQUAPORIN NIP1-1-RELATED 5 262 - -
Bda02g00045 267 SUPERFAMILY Aquaporin-like 28 254 IPR023271 -
Bda02g00045 267 ProSitePatterns MIP family signature. 91 99 IPR022357 -
Bda02g00045 267 Gene3D Glycerol uptake facilitator protein. 2 255 IPR023271 -
Bda02g00045 267 Pfam Major intrinsic protein 29 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 TIGRFAM MIP: MIP family channel proteins 38 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 110 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 155 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 34 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00045 267 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00045 Bda09g00825 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00045 Bda-Chr2:2083483 Bda09g00826 Bda-Chr9:17878049 2.48E-154 dispersed
Bda02g00045 Bda-Chr2:2083483 Bda09g00825 Bda-Chr9:17868283 1.06E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00045 K09874 - vvi:100263543 400.208