Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00075 ATGGAGAAAGAGCCGCTTCTCCCATATGCAAGCGCTAGAAGAAAACCATCGGCACTGATGCCCCAACTCTGCCCCCTTCCTGAAAACGACGAGATTACTCTTCCCATCACTCCAACAGAGCTAAAAGACCGCATTATTTTTGGCCATTCTTCTTCCCCACAGGACTCCTCCCCCATTGTTGAAGCTCTAACTCTCGCTTCTGCCAGAACCTCTTCCTCCTCTTCTTTCCAGGACCAGACTGCCTCACTTGACCCTGAGTCTCATTCCCCACAAGCGTGGGCAATTGACCTCAACTGCCCATGGACCAAAACCAATCTCCACCGCTCCAAAACTGCCCCGGCCATGGCTACAATCAATGAAATTAACCAACCCAATGCGCCTAGGCCTCAATTCGGTGAACCAACGATTATTCGTCAGGCTTGTATTCTTCTCACTTTATACTTGTCATTGGGAATCATTATATATTGGTTCAATCGAAATAATTTTTCGGCTACCGAGACTCATCCTGTCGTAGATGCTCTCTACTTCTGCATTGTTACGATGTGCACAATCGGTTACGGAGATATTACTCCAAATAGCACTGCAACAAAGTTGTTTTCAATACTTTTTGTGCTGGTGGGGTTCGGTTTTATGGATATTTTGCTCACTGGAATGGTGAGTTATGTGCTTGATTTGCAGGAGAGTTATTTACTGAAGAGTGTTAAGGGTGAGGGGGAAAAAGAGAAGGCAAGTTCATTTTTAGTTGATGTGAAAAAGGGAAGAATGAGAATTAGAATGAAAGTTGGATTGGCTTTGGGGGTTGTTGTTCTTTGTATTGGCATTGGTATGACTGTAATGCATTTCGTCGAGAGACTTGGATGGTTGGATTCGTTTTATCTTTCTGTCATGTCTGTTACGACTGTTGGATATGGTGACCGGGCCTTCAATTCTATGACTGGTCGCATTTTTGCTTCGATTTGGTTGCTTGTGTCGACACTTGCAGTTGCTCGAGCTTTTCTTTATCTGGCTGAGGCTAGAGTTGATAAAAGGCATAGAAGGATGACAAAGTGGATTCTTAGTCATGATATGACTGTGTCTGAATTTCTCGCAGCTGACATAGACAACAATGGCTTTGTCAGCAAATCAGAGTACGTGATATACAAGCTGAAGGAAATGGGGAAGGTATCTGAGAAAGACGTTATGCAGATCTGCAATAAGTTTGAGAGATTAGACGTTGGCAACTGTGGGAAGATAACTCTAGCTGATCTCATGGATTCCCATCACTAA 1266 43.92 MEKEPLLPYASARRKPSALMPQLCPLPENDEITLPITPTELKDRIIFGHSSSPQDSSPIVEALTLASARTSSSSSFQDQTASLDPESHSPQAWAIDLNCPWTKTNLHRSKTAPAMATINEINQPNAPRPQFGEPTIIRQACILLTLYLSLGIIIYWFNRNNFSATETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFMDILLTGMVSYVLDLQESYLLKSVKGEGEKEKASSFLVDVKKGRMRIRMKVGLALGVVVLCIGIGMTVMHFVERLGWLDSFYLSVMSVTTVGYGDRAFNSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRRMTKWILSHDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDVMQICNKFERLDVGNCGKITLADLMDSHH 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2986172 2988698 + Bda014336.1 Bda02g00075 2370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00075 421 Gene3D - 135 232 - -
Bda02g00075 421 PRINTS Two pore domain K+ channel signature 179 207 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda02g00075 421 PRINTS Two pore domain K+ channel signature 299 308 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda02g00075 421 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 84 416 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda02g00075 421 Gene3D - 330 421 - -
Bda02g00075 421 Gene3D - 266 329 - -
Bda02g00075 421 SUPERFAMILY EF-hand 351 418 IPR011992 -
Bda02g00075 421 Pfam Ion channel 267 336 IPR013099 -
Bda02g00075 421 Pfam Ion channel 142 222 IPR013099 -
Bda02g00075 421 SUPERFAMILY Voltage-gated potassium channels 138 227 - -
Bda02g00075 421 PANTHER TWO-PORE POTASSIUM CHANNEL 3 84 416 - -
Bda02g00075 421 SUPERFAMILY Voltage-gated potassium channels 252 358 - -
Bda02g00075 421 ProSitePatterns EF-hand calcium-binding domain. 365 377 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00075 Bda-Chr2:2986172 Bda15g00854 Bda-Chr15:13401791 4.77E-108 dispersed
Bda02g00075 Bda-Chr2:2986172 Bda14g01437 Bda-Chr14:18739862 1.49E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00075 K05389 - csv:101220017 657.136