Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00076 | ATGTCTGACGAACAGAGAGAGATTTCCTTATACCCTTTCCAATCACAAGATGACCTTACTTCAATGGAGATTCCGGCCTTAGCCTATCATGATTTCCAACAGTTTGACTCTAATTCATACACGAACTTGTTTGATTGTCTGCAATCGCCCATGGAGTACAGCTCAGTTACAGAACCCTTTGGTCTATTTCTTCCCGAAGTAGAATATAAGCCAGTCGAGCTCGGAAATTCATTATCAGCGGCTCCAATCTCTCCGGCGTCAGCTTCCTCTTCTTCTGAGGCGGGTGCCGACCAAGAAGAGTCTGGTAAAAGCGGTAAGAGTAAGCAGAACAGCAAAGTGAAAGAAGATAAATCAAAAGTCAGCAGGAAAGAGAAGAAGGCAAGAGAGCCAAGATTTGCTTTCATGACCAAGAGTGAAGTTGATCTCCTTGAAGATGGATACCGATGGAGAAAATATGGTCAGAAAGCTGTCAAGCATAGCCCCTATCCAAGAAGCTATTACAGGTGCACTACTCAGAAATGCATGGTGAAGAAACGAGTGGAGAGATCGTACGAGGACCCGTCTATTGTGATCAATACGTACGAAGGCCAACACAACCATCCGATTCCATCATCTCATAGAGGAATGTACTCGGCCTCACATGTGATGGTCCCACCTTCTTCAATCATAGATCAACCACCGTTGAGATTTTGTGGAGATATATCGACGGCTGAGAATCAGATCATTCCCCACAATGTGAACCATCAGACTCTGGATTATATTCATCAGCTGTTATACTCACACTCGCAGCAGTCTGACAGTGGACATTTTTAG | 813 | 44.4 | MSDEQREISLYPFQSQDDLTSMEIPALAYHDFQQFDSNSYTNLFDCLQSPMEYSSVTEPFGLFLPEVEYKPVELGNSLSAAPISPASASSSSEAGADQEESGKSGKSKQNSKVKEDKSKVSRKEKKAREPRFAFMTKSEVDLLEDGYRWRKYGQKAVKHSPYPRSYYRCTTQKCMVKKRVERSYEDPSIVINTYEGQHNHPIPSSHRGMYSASHVMVPPSSIIDQPPLRFCGDISTAENQIIPHNVNHQTLDYIHQLLYSHSQQSDSGHF | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2990854 | 2992219 | + | Bda014337.1 | Bda02g00076 | 2371 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00076 | 270 | MobiDBLite | consensus disorder prediction | 83 | 128 | - | - | |
Bda02g00076 | 270 | ProSiteProfiles | WRKY domain profile. | 138 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00076 | 270 | Pfam | WRKY DNA -binding domain | 144 | 201 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00076 | 270 | Gene3D | WRKY domain | 128 | 204 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00076 | 270 | MobiDBLite | consensus disorder prediction | 99 | 128 | - | - | |
Bda02g00076 | 270 | MobiDBLite | consensus disorder prediction | 83 | 98 | - | - | |
Bda02g00076 | 270 | PANTHER | WRKY TRANSCRIPTION FACTOR 28-RELATED | 27 | 214 | - | - | |
Bda02g00076 | 270 | SMART | WRKY_cls | 143 | 202 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00076 | 270 | SUPERFAMILY | WRKY DNA-binding domain | 135 | 203 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00076 | 270 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 27 | 214 | IPR044810 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00076 | Bda-Chr2:2990854 | Bda15g00853 | Bda-Chr15:13353748 | 6.27E-49 | dispersed | |
Bda11g00335 | Bda-Chr11:3759636 | Bda02g00076 | Bda-Chr2:2990854 | 1.41E-35 | dispersed | |
Bda13g01591 | Bda-Chr13:39487876 | Bda02g00076 | Bda-Chr2:2990854 | 4.45E-32 | dispersed | |
Bda14g01185 | Bda-Chr14:11728735 | Bda02g00076 | Bda-Chr2:2990854 | 2.24E-33 | dispersed | |
Bda02g00076 | Bda-Chr2:2990854 | Bda13g00224 | Bda-Chr13:2849666 | 1.62E-43 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15530 | PF03106 | WRKY | 8.20E-25 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00076 | - | - | rcu:8284011 | 201.445 |