Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00076 ATGTCTGACGAACAGAGAGAGATTTCCTTATACCCTTTCCAATCACAAGATGACCTTACTTCAATGGAGATTCCGGCCTTAGCCTATCATGATTTCCAACAGTTTGACTCTAATTCATACACGAACTTGTTTGATTGTCTGCAATCGCCCATGGAGTACAGCTCAGTTACAGAACCCTTTGGTCTATTTCTTCCCGAAGTAGAATATAAGCCAGTCGAGCTCGGAAATTCATTATCAGCGGCTCCAATCTCTCCGGCGTCAGCTTCCTCTTCTTCTGAGGCGGGTGCCGACCAAGAAGAGTCTGGTAAAAGCGGTAAGAGTAAGCAGAACAGCAAAGTGAAAGAAGATAAATCAAAAGTCAGCAGGAAAGAGAAGAAGGCAAGAGAGCCAAGATTTGCTTTCATGACCAAGAGTGAAGTTGATCTCCTTGAAGATGGATACCGATGGAGAAAATATGGTCAGAAAGCTGTCAAGCATAGCCCCTATCCAAGAAGCTATTACAGGTGCACTACTCAGAAATGCATGGTGAAGAAACGAGTGGAGAGATCGTACGAGGACCCGTCTATTGTGATCAATACGTACGAAGGCCAACACAACCATCCGATTCCATCATCTCATAGAGGAATGTACTCGGCCTCACATGTGATGGTCCCACCTTCTTCAATCATAGATCAACCACCGTTGAGATTTTGTGGAGATATATCGACGGCTGAGAATCAGATCATTCCCCACAATGTGAACCATCAGACTCTGGATTATATTCATCAGCTGTTATACTCACACTCGCAGCAGTCTGACAGTGGACATTTTTAG 813 44.4 MSDEQREISLYPFQSQDDLTSMEIPALAYHDFQQFDSNSYTNLFDCLQSPMEYSSVTEPFGLFLPEVEYKPVELGNSLSAAPISPASASSSSEAGADQEESGKSGKSKQNSKVKEDKSKVSRKEKKAREPRFAFMTKSEVDLLEDGYRWRKYGQKAVKHSPYPRSYYRCTTQKCMVKKRVERSYEDPSIVINTYEGQHNHPIPSSHRGMYSASHVMVPPSSIIDQPPLRFCGDISTAENQIIPHNVNHQTLDYIHQLLYSHSQQSDSGHF 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2990854 2992219 + Bda014337.1 Bda02g00076 2371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00076 270 MobiDBLite consensus disorder prediction 83 128 - -
Bda02g00076 270 ProSiteProfiles WRKY domain profile. 138 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00076 270 Pfam WRKY DNA -binding domain 144 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00076 270 Gene3D WRKY domain 128 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00076 270 MobiDBLite consensus disorder prediction 99 128 - -
Bda02g00076 270 MobiDBLite consensus disorder prediction 83 98 - -
Bda02g00076 270 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 27 214 - -
Bda02g00076 270 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00076 270 SUPERFAMILY WRKY DNA-binding domain 135 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00076 270 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 214 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00076 Bda-Chr2:2990854 Bda15g00853 Bda-Chr15:13353748 6.27E-49 dispersed
Bda11g00335 Bda-Chr11:3759636 Bda02g00076 Bda-Chr2:2990854 1.41E-35 dispersed
Bda13g01591 Bda-Chr13:39487876 Bda02g00076 Bda-Chr2:2990854 4.45E-32 dispersed
Bda14g01185 Bda-Chr14:11728735 Bda02g00076 Bda-Chr2:2990854 2.24E-33 dispersed
Bda02g00076 Bda-Chr2:2990854 Bda13g00224 Bda-Chr13:2849666 1.62E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15530 PF03106 WRKY 8.20E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00076 - - rcu:8284011 201.445