Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00137 ATGTCTTCGAAATCTGGAAGTAGCGGCCGAACGAGAGTCGGGAAGTATGAGCTGGGTCGCACTCTGGGCGAGGGTAATTTCGCAAAGGTGAAATTCGCTCGGAACATAGAGACCGGCGATAATGCGGCTATCAAAATCCTTGATAAGGAGAAAATTCTCAAGCACAAGATGATAGGGCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTGATGGCTAGCAGGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGACAAAATTGCCAGTAAAGGGAAATTAAAAGAAGATGAGGCAAGAAAGTACTTCCAGCAGCTTATTAATGCTGTGGATTATTGTCATAGCAGAGGTGTTTTTCATCGTGACTTAAAGCCTGAAAATTTGCTGCTAGATTCTAATGGAGTTCTTAAAGTTTCTGATTTTGGGTTGAGTGCTCTACCTCAGCAAGTTCGAGAAGACGGTCTGCTCCACACAACCTGTGGCACACCAAATTATGTTGCGCCTGAGGTAATCAATAACAAAGGCTATGACGGAGCACTAGCAGATTTGTGGTCATGTGGTGTGATTCTTTTTGTCCTAATGGCTGGTTATTTGCCCTTTGAAGATTCCAACCTTGCAGTATTGTATAAAAAGATACATAAGGCTGAGTTCACTTGTCCATCATGGTTTTCAACGAGTGGAAAGAAGTTAATAAAGCGGATTCTGGATCCCAACCCCTCAACTCGAATTACCATTGCTGAGGTTATTGAGAATGAATGGTTTAAGAAAGGATATAAGCCACCCATTTATGAACAAGCTGACGTTACTCTTGATGATGTTGATGCTATCTTCAATGAATCGGGAGATACACGCAACCTTGTTGTAGAGAGGAGAGAAGAGGGCCCTGTGGCTCCTGTCACCATGAATGCTTTTGAGCTCATCTCTACGTCTCAGGGCCTCAACCTTGGCTCACTTTTTGAAAAGCAAATGGGACTTGCCAAACGTGAAACAAGGTTCACATCCAACTGTCCTGCTAATGTGATCATTTCCAAGATTGAGGAAGCGGCAACTCCCTTGGGATTTGATGTGAAGAAAAATAACTTCAAGTTGAAACTTCAAGGAGGGAAAACTGGTCGTAAAGGTCATTTATCAGTTGCCACCGAGATTTATGAGGTTGCCCCTTCACTTTACATGGTCGAAGTTCGCAAAGCTGGAGGAGACACTTTAGAATTTCACAAGTTCTATAAGAACCTCTCCACTGGGCTGAAAGATATAGTATGGAAAACTGATGGTAGCGTAGAGGAAGAAATTGGTGGCGCTGGTGTTGTACAATCTGGGTAA 1371 42.45 MSSKSGSSGRTRVGKYELGRTLGEGNFAKVKFARNIETGDNAAIKILDKEKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASRTKIYIVMEFVTGGELFDKIASKGKLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGALADLWSCGVILFVLMAGYLPFEDSNLAVLYKKIHKAEFTCPSWFSTSGKKLIKRILDPNPSTRITIAEVIENEWFKKGYKPPIYEQADVTLDDVDAIFNESGDTRNLVVERREEGPVAPVTMNAFELISTSQGLNLGSLFEKQMGLAKRETRFTSNCPANVIISKIEEAATPLGFDVKKNNFKLKLQGGKTGRKGHLSVATEIYEVAPSLYMVEVRKAGGDTLEFHKFYKNLSTGLKDIVWKTDGSVEEEIGGAGVVQSG 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19715219 19731929 + Bda014578.1 Bda02g00137 2432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00137 456 Gene3D Kinase associated domain 1, KA1 318 438 - -
Bda02g00137 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 443 - -
Bda02g00137 456 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00137 456 PANTHER SERINE/THREONINE KINASE 10 443 - -
Bda02g00137 456 CDD STKc_SnRK3 15 270 - -
Bda02g00137 456 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00137 456 CDD CIPK_C 319 434 - -
Bda02g00137 456 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bda02g00137 456 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00137 456 Pfam NAF domain 315 375 IPR004041 GO:0007165
Bda02g00137 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bda02g00137 456 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Bda02g00137 456 Gene3D Transferase(Phosphotransferase) domain 1 9 317 - -
Bda02g00137 456 SUPERFAMILY Protein kinase-like (PK-like) 13 282 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00137 Bda09g00876 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00137 Bda-Chr2:19715219 Bda09g00876 Bda-Chr9:22627210 0 dispersed
Bda03g00854 Bda-Chr3:7390250 Bda02g00137 Bda-Chr2:19715219 2.02E-114 dispersed
Bda08g00341 Bda-Chr8:3480425 Bda02g00137 Bda-Chr2:19715219 1.33E-160 dispersed
Bda13g01699 Bda-Chr13:40350190 Bda02g00137 Bda-Chr2:19715219 5.51E-87 dispersed
Bda01g00846 Bda-Chr1:40647996 Bda02g00137 Bda-Chr2:19715219 2.99E-162 transposed
Bda01g00868 Bda-Chr1:41457114 Bda02g00137 Bda-Chr2:19715219 2.70E-129 transposed
Bda02g00033 Bda-Chr2:1652112 Bda02g00137 Bda-Chr2:19715219 1.23E-139 transposed
Bda13g00406 Bda-Chr13:5008980 Bda02g00137 Bda-Chr2:19715219 0 transposed
Bda13g00417 Bda-Chr13:5085054 Bda02g00137 Bda-Chr2:19715219 8.75E-52 transposed
Bda01g00137 Bda-Chr1:21088758 Bda02g00137 Bda-Chr2:19715219 1.15E-91 wgd
Bda02g00137 Bda-Chr2:19715219 Bda09g00946 Bda-Chr9:37511459 2.10E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69482 PF00069 Pkinase 5.30E-74 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00137 - - zju:107414012 795.808