Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00187 | ATGGTGAAGTCGAAGAAGTTCAGAGGAGTCAGGCAGAGACATTGGGGATCATGGGTATCGGAGATTCGCCATCCATTACTAAAGAGAAGGATATGGCTAGGAACATTTGATACAGCCGAAGAGGCAGCCAAAGCATACGATCAAGCCGCCATTTTAATGAGCGGCCAGAATGCCAAAACTAATTTTCCAGCGGCTTCCCTCAGAGACTCCAACCCCAGGGTGGATTCGCCATCTTCACCGGAAAATTTATCAGATATTCTCCATGCCAAGCTAAGAAAGTGCTGCAAATCTCCTTCGCCTTCAATGACCTGCTTGAGGCTCGACGCACAGAATTCTTATATCGGCGTTTGGCAAAAGCGTGCGGGTCAAAGCGCCGCTTCCCACTGGGTCATGACGTTTCAGCTCGGGAATGAGAAGAAAAATTGTCTTGAGATTTCGCCTTCTTCCCCTTCGTCTTTCAGGCAAGTTCAGCTTCCGCCATCGGAAGCACCTGAAGTCGTTCCCGCTCAGATCAATGAAGAAGAGGCACTTGCACTGCAAATGATAGAGGAACTGCTTTCTATTAACGAGGATGAGAACTTGTACCATTAG | 591 | 48.22 | MVKSKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFDTAEEAAKAYDQAAILMSGQNAKTNFPAASLRDSNPRVDSPSSPENLSDILHAKLRKCCKSPSPSMTCLRLDAQNSYIGVWQKRAGQSAASHWVMTFQLGNEKKNCLEISPSSPSSFRQVQLPPSEAPEVVPAQINEEEALALQMIEELLSINEDENLYH | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36024788 | 36025517 | - | Bda014765.1 | Bda02g00187 | 2482 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00187 | 196 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 191 | - | - | |
Bda02g00187 | 196 | Pfam | AP2 domain | 6 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677 | |
Bda02g00187 | 196 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Bda02g00187 | 196 | PANTHER | AP2-EREBP TRANSCRIPTION FACTOR | 1 | 191 | - | - | |
Bda02g00187 | 196 | CDD | AP2 | 5 | 65 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00187 | Bda-Chr2:36024788 | Bda11g00143 | Bda-Chr11:1883290 | 9.58E-83 | dispersed | |
Bda04g00139 | Bda-Chr4:3414228 | Bda02g00187 | Bda-Chr2:36024788 | 4.01E-142 | transposed | |
Bda12g00577 | Bda-Chr12:12270133 | Bda02g00187 | Bda-Chr2:36024788 | 5.39E-30 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15532 | PF00847 | AP2 | 3.50E-13 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00187 | - | - | qsu:112002896 | 236.113 |