Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00217 ATGAAGAGACGATCGAGAAAAGTTGGAAAGTATGAAGTTGGGCGAACTGTTGGCGAAGGAACATTCGCCAAGGTTAAGTTTGCACAAAATACGGAGACGGGAGAGAGTGTCGCCGTCAAAGTTATGGCCAAAAGCACCATTCTCAGGCACAGAATGGTCGATCAGATCAAAAGAGAGATATCCATAATGAAGATTGTGAGGCATCCAAATATCGTTAGATTGCACGAGGTGTTGGCGAGTCGGACAAAGATATATATAATCCTCGAGTTTGTTAGTGGTGGAGAACTATACGATAAAATCGTTCATCGACAAAAACTTCCTGAACATGAGTGTCGAAAATATTTTCAACAGTTAATAGATGCAGTTTCTCATTGCCACAAAAAGGGTGTGTATCACAGGGATCTGAAGCCGGAAAACCTTCTTCTTGATGCTTGTGGAAATTTAAAGGTTTCTGATTTTGGACTTAGCGCTTTGCCTCAAAGCCTTGGGCTGCTTCACACGACATGTGGAACTCCAAATTATGTTGCACCAGAGGTGCTTGGAGGGCAGGGCTATGATGGTGCAGCGGCTGATGTATGGTCGTGTGGAGTAATCCTTTATGTCCTTATGGCCGGATATCTTCCATTTTCAGAGTCTGACCTACCAACCCTTTTTAGAAAGATCACGACTGCTGATTTTTCTTGTCCAAGTTTGTTTTCACCTGGTGCAAAGTCATTGATACAGAGAATTCTTACTGCCAATCCTAAAATGCGGATTCAAATACAAGAAATTCGAAAAGACCCCTGGTTTAGGAAAGACTATATCCCAGTCAAACTAGGGGAAACCGAGGAAGTAAATTTTGATGATGTTCATGCTGTCTTTGATGAAATTGAGGAGCAATATGATGTGGCTGAAAAAGGAGAAACTAACGAGAGTGGTCCGTTAATCATGAATGCATTTGAGTTGATTACACTATCTCAAGGGCTGAATCTATCTGCTTTGTTTGATCGACAACAGGATTATGTAAAGCGGCAAACTAGGTTTGTTTCACGCAAACCTGCCAAAGATATACTGTCGACGGTCAAAGCAGCAGCAGAATCGATGAGTTTTAAGGTCCACACACGGAATTACAAGACTAGGCTGGAAGGAATATCTGAAAGTAGAGCTGGACAATTTGCTGTTGTATTGGAGATTTACGAAGTTGCTCCTTCCCTTTTCATGGTGGATGTTCGTAAGGCTTCTGGCGACACTCTCGAATATCACAAGTTCTACAAAAAATTCTGTGCCAAGCTAGAAAGTATAATATGGAAGCCAACTGAGGGCATTGGAAATAACAATCTGCTAAGAACAGTCTCTTGCTGA 1341 41.91 MKRRSRKVGKYEVGRTVGEGTFAKVKFAQNTETGESVAVKVMAKSTILRHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKIYIILEFVSGGELYDKIVHRQKLPEHECRKYFQQLIDAVSHCHKKGVYHRDLKPENLLLDACGNLKVSDFGLSALPQSLGLLHTTCGTPNYVAPEVLGGQGYDGAAADVWSCGVILYVLMAGYLPFSESDLPTLFRKITTADFSCPSLFSPGAKSLIQRILTANPKMRIQIQEIRKDPWFRKDYIPVKLGETEEVNFDDVHAVFDEIEEQYDVAEKGETNESGPLIMNAFELITLSQGLNLSALFDRQQDYVKRQTRFVSRKPAKDILSTVKAAAESMSFKVHTRNYKTRLEGISESRAGQFAVVLEIYEVAPSLFMVDVRKASGDTLEYHKFYKKFCAKLESIIWKPTEGIGNNNLLRTVSC 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37984911 37988561 + Bda014823.1 Bda02g00217 2512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00217 446 Gene3D Transferase(Phosphotransferase) domain 1 91 286 - -
Bda02g00217 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Bda02g00217 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bda02g00217 446 PANTHER - 6 440 - -
Bda02g00217 446 SUPERFAMILY Protein kinase-like (PK-like) 8 277 IPR011009 -
Bda02g00217 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bda02g00217 446 Pfam Protein kinase domain 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00217 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bda02g00217 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bda02g00217 446 CDD CIPK_C 311 421 - -
Bda02g00217 446 ProSiteProfiles Protein kinase domain profile. 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00217 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 440 - -
Bda02g00217 446 Gene3D Kinase associated domain 1, KA1 304 430 - -
Bda02g00217 446 SMART serkin_6 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00217 Bda-Chr2:37984911 Bda09g00480 Bda-Chr9:6292252 0 dispersed
Bda13g01349 Bda-Chr13:35841614 Bda02g00217 Bda-Chr2:37984911 0 transposed
Bda13g01320 Bda-Chr13:35437249 Bda02g00217 Bda-Chr2:37984911 1.43E-50 transposed
Bda02g00217 Bda-Chr2:37984911 Bda03g01374 Bda-Chr3:49886726 5.78E-46 wgd
Bda02g00217 Bda-Chr2:37984911 Bda09g00876 Bda-Chr9:22627210 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69485 PF00069 Pkinase 3.00E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00217 - - mnt:21385825 726.857