Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00223 | ATTCTGTCTACTCTGCAGACTGCCTGTGGTTTGAGTTCGTCGTCTGGAAACTCGGGAAAAGGGAGAAGTAAGTCATCAATCACCAGAGTGAGTCATGGATTTCACTTGATTGAAGGAAAATCAGGCCATGATATGGAGGATTATCATGTGGCTGAGTACCGACGAACGAAAAATCACGAGCTGGGATTGTTTGCGATATTTGACGGTCACCTCGGGGATCGAGTCCCATCCTTCTTGAAAGATCACCTCTTCAACAACATTCTTGATGAGCCAAATTTCTTCAAAGACCAAGAGGAGGCAATCAAGAATGCATATCACTCCACTAATAAGTTTATCTTGGAAAACTCTATGCAATTGGGTCCTGGTGGCTCTACTGCAGTAACTGCCATAGTCATTGACGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCGAGAGCTGTTGTGTGTGAGAGGGGTGCTGCCAATCAACTTACAGTAGACCATGAGCCACATAATGAACGCCCAAGGATAGAGAAGCATGGGGGCTTCGTGACTACCTTACCTGGTATAACCTTCTTTCCCTTTTTTTTATGCTTTGTTGTATATGATTTTCACATAATTATTTTTAATTTTAGTTTAAAAGTCAATAGTATTAAAATATTTAAGCCTATAATTATTTTCTCATTTTTCGTTATGAAGAATCAAGAGGCAGTTGATCTGATTAAGCCCATTAAAGATCCTCAAGCAGCAGCTAAGCAATTAGCGAACGAGGCATTGGCAAGAAAAAGCAAAGACGACATATCATGCATTGTGATTCGGTTTGGATAA | 810 | 40.74 | ILSTLQTACGLSSSSGNSGKGRSKSSITRVSHGFHLIEGKSGHDMEDYHVAEYRRTKNHELGLFAIFDGHLGDRVPSFLKDHLFNNILDEPNFFKDQEEAIKNAYHSTNKFILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGAANQLTVDHEPHNERPRIEKHGGFVTTLPGITFFPFFLCFVVYDFHIIIFNFSLKVNSIKIFKPIIIFSFFVMKNQEAVDLIKPIKDPQAAAKQLANEALARKSKDDISCIVIRFG | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38172919 | 38182317 | + | Bda014829.1 | Bda02g00223 | 2518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00223 | 269 | CDD | PP2Cc | 45 | 268 | IPR001932 | - | |
Bda02g00223 | 269 | Pfam | Protein phosphatase 2C | 43 | 179 | IPR001932 | - | |
Bda02g00223 | 269 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 224 | 269 | - | - | |
Bda02g00223 | 269 | Gene3D | - | 15 | 190 | IPR036457 | - | |
Bda02g00223 | 269 | PANTHER | ALPHABET, ISOFORM E-RELATED | 224 | 269 | - | - | |
Bda02g00223 | 269 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 268 | IPR001932 | - | |
Bda02g00223 | 269 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bda02g00223 | 269 | SUPERFAMILY | PP2C-like | 23 | 269 | IPR036457 | - | |
Bda02g00223 | 269 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 183 | - | - | |
Bda02g00223 | 269 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 1 | 183 | - | - | |
Bda02g00223 | 269 | SMART | PP2C_4 | 27 | 266 | IPR001932 | - | |
Bda02g00223 | 269 | Gene3D | - | 221 | 269 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00223 | Bda-Chr2:38172919 | Bda09g00516 | Bda-Chr9:6826972 | 2.57E-81 | dispersed | |
Bda02g00223 | Bda-Chr2:38172919 | Bda09g01017 | Bda-Chr9:40189384 | 5.97E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00223 | K17506 | - | cpap:110811361 | 355.525 |