Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00223 ATTCTGTCTACTCTGCAGACTGCCTGTGGTTTGAGTTCGTCGTCTGGAAACTCGGGAAAAGGGAGAAGTAAGTCATCAATCACCAGAGTGAGTCATGGATTTCACTTGATTGAAGGAAAATCAGGCCATGATATGGAGGATTATCATGTGGCTGAGTACCGACGAACGAAAAATCACGAGCTGGGATTGTTTGCGATATTTGACGGTCACCTCGGGGATCGAGTCCCATCCTTCTTGAAAGATCACCTCTTCAACAACATTCTTGATGAGCCAAATTTCTTCAAAGACCAAGAGGAGGCAATCAAGAATGCATATCACTCCACTAATAAGTTTATCTTGGAAAACTCTATGCAATTGGGTCCTGGTGGCTCTACTGCAGTAACTGCCATAGTCATTGACGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCGAGAGCTGTTGTGTGTGAGAGGGGTGCTGCCAATCAACTTACAGTAGACCATGAGCCACATAATGAACGCCCAAGGATAGAGAAGCATGGGGGCTTCGTGACTACCTTACCTGGTATAACCTTCTTTCCCTTTTTTTTATGCTTTGTTGTATATGATTTTCACATAATTATTTTTAATTTTAGTTTAAAAGTCAATAGTATTAAAATATTTAAGCCTATAATTATTTTCTCATTTTTCGTTATGAAGAATCAAGAGGCAGTTGATCTGATTAAGCCCATTAAAGATCCTCAAGCAGCAGCTAAGCAATTAGCGAACGAGGCATTGGCAAGAAAAAGCAAAGACGACATATCATGCATTGTGATTCGGTTTGGATAA 810 40.74 ILSTLQTACGLSSSSGNSGKGRSKSSITRVSHGFHLIEGKSGHDMEDYHVAEYRRTKNHELGLFAIFDGHLGDRVPSFLKDHLFNNILDEPNFFKDQEEAIKNAYHSTNKFILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGAANQLTVDHEPHNERPRIEKHGGFVTTLPGITFFPFFLCFVVYDFHIIIFNFSLKVNSIKIFKPIIIFSFFVMKNQEAVDLIKPIKDPQAAAKQLANEALARKSKDDISCIVIRFG 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38172919 38182317 + Bda014829.1 Bda02g00223 2518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00223 269 CDD PP2Cc 45 268 IPR001932 -
Bda02g00223 269 Pfam Protein phosphatase 2C 43 179 IPR001932 -
Bda02g00223 269 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 224 269 - -
Bda02g00223 269 Gene3D - 15 190 IPR036457 -
Bda02g00223 269 PANTHER ALPHABET, ISOFORM E-RELATED 224 269 - -
Bda02g00223 269 ProSiteProfiles PPM-type phosphatase domain profile. 31 268 IPR001932 -
Bda02g00223 269 MobiDBLite consensus disorder prediction 1 27 - -
Bda02g00223 269 SUPERFAMILY PP2C-like 23 269 IPR036457 -
Bda02g00223 269 PANTHER ALPHABET, ISOFORM E-RELATED 1 183 - -
Bda02g00223 269 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 1 183 - -
Bda02g00223 269 SMART PP2C_4 27 266 IPR001932 -
Bda02g00223 269 Gene3D - 221 269 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00223 Bda-Chr2:38172919 Bda09g00516 Bda-Chr9:6826972 2.57E-81 dispersed
Bda02g00223 Bda-Chr2:38172919 Bda09g01017 Bda-Chr9:40189384 5.97E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00223 K17506 - cpap:110811361 355.525