Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00228 ATGCTGGAGGGTAATCCTAAATTCGCGGGAATTATTGACCTGAACAAACACGATTATGATTTCTCTCAAGGGTTTTATCATAAACTGGACGAGGATACCAACATGTCAGTTGATAGTTTTGCAAGCTTGAACGCCAGCAACGACGGAGGGTCTGTTGCAATGTCTGTAGATAACAACAGTAGTGTTGCATCAAATGAATCTCATACTCGTATTTTGAACCACCAGGGTCTTCGTCGGCGTCCCAATGACAGTTACACCGTGCAACAGAGTACTCATAAGGGAAGAGTAACACATAATTTAAGCGATGATGCACTTGCCAGAGCACTGTTTGACAGTAGCACCCCTACCCAAGGACTTGAAAATTTTGAAGACTGGACGATTGATTTGTCAAGGCTTAATATGGGGGAAGCTTTTGCTCAAGGAGCTTTTGGAAAACTCTACCGAGGCACTTACAATGGTGAAGATGTTGCTATCAAGATCTTGGAGAGGCCACATAATGATATTGACAAGGCTCTGTTGATGGAGCAACAGTTTCAGCAGGAGGTCATTATGTTGGCTACGCTGAAGCATCCAAATATTGTACGTTTTATTGGTGGCTGTAGGAAGCCGATGCTTTGGTGCATTGTGACTGAATATGCAAAAGGGGGTTCAGTTCGACAATTCTTAACAAAGCGGCAAAGTCGATCAGTTCCTCTTAAACTAGCCGTCAAGCAAGCTTTAGACGTTGCGAGAGGGATGGCATATGTCCATGAGCTCGGACTAATACATCGGGACTTAAAATCTGACAACTTGTTGATTTTTGCAGACAAATCTATAAAAATTGCTGACTTTGGAGTTGCCCGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGTTGGATGGCTCCGGAGATGATCCAGCACAGGCCCTATACACAAAAAGTAGATGTCTACAGCTTTGGGATCGTCCTTTGGGAACTAATAACCGGAATGCTTCCATTCCAAAACATGACAGCTGTACAGGCTGCATTTGCAGTTGTGAACAAGGGTTTTCGTCCTGTAGTCCCCACCGATTGCCTGCCTGTTCTGAGCGAGATAATGAGACGCTGCTGGGATGCTGATCCAAACGTCCGGCCCCACTTCACCGAGGTTGTCAGAATGCTGGAGCATGCTCAGACCGAGATCATGACCACCATCCGGAAGGCCCGTTTTAGGTGTTGCATTGCCCAGCCTGTAACTGCAGACTGA 1242 45.97 MLEGNPKFAGIIDLNKHDYDFSQGFYHKLDEDTNMSVDSFASLNASNDGGSVAMSVDNNSSVASNESHTRILNHQGLRRRPNDSYTVQQSTHKGRVTHNLSDDALARALFDSSTPTQGLENFEDWTIDLSRLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPHNDIDKALLMEQQFQQEVIMLATLKHPNIVRFIGGCRKPMLWCIVTEYAKGGSVRQFLTKRQSRSVPLKLAVKQALDVARGMAYVHELGLIHRDLKSDNLLIFADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGFRPVVPTDCLPVLSEIMRRCWDADPNVRPHFTEVVRMLEHAQTEIMTTIRKARFRCCIAQPVTAD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38377088 38380826 + Bda014836.1 Bda02g00228 2523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00228 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 403 - -
Bda02g00228 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 ProSiteProfiles Protein kinase domain profile. 132 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00228 413 SUPERFAMILY Protein kinase-like (PK-like) 115 386 IPR011009 -
Bda02g00228 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 403 - -
Bda02g00228 413 CDD STKc_MAP3K-like 139 386 - -
Bda02g00228 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bda02g00228 413 Gene3D Transferase(Phosphotransferase) domain 1 215 407 - -
Bda02g00228 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Bda02g00228 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Bda02g00228 413 SMART serkin_6 132 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00228 Bda-Chr2:38377088 Bda14g00817 Bda-Chr14:6283031 1.34E-99 dispersed
Bda01g01566 Bda-Chr1:51528641 Bda02g00228 Bda-Chr2:38377088 4.72E-21 transposed
Bda02g00228 Bda-Chr2:38377088 Bda09g01013 Bda-Chr9:40133049 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69486 PF07714 PK_Tyr_Ser-Thr 1.30E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00228 - - csv:101213713 719.539