Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00235 ATGGATTATATTTATCTTCTCTCTCTCCTGCTCGTATTCCTTCCTTCCATTCTTCTCTTCTTCGTCGTCTTCCAAAAGTACAGATCTCGTCAATTTTCCGGCATTAATGCTCCTCCGGGAAGCATGGGGTACCCTGTAATCGGAGAGAGCTTGGCTTTCTTGTCCGCCGGCTGGAGAGGTCATCCTGAAAACTTTGTGCTGGACAGGATGAACAAGCTCGGGTCTGCCATTTTCAAGACCTCCATTATAGGTGTTAAAACGGTTGTTTTTTGTGGGCCTTCTTGCAACAAGTTCTTGTTTTCTAATGAGAACAAGCTGGTGGTTGCATGGTGGCCTGATGCAGTCTACAAGATCTTCCCTTCCACTGGTCAGACGTCCTCCATTGAAGAAGCTTGGAAGCTTAAAAAGCTTCTCCCTCAGTTTCTCAACCCTGAAGCTATTCGAGGATACGTTGAAGTCATGGACTCCATTGCTGATAAACATTTTTCTTCCTTCTGGGAGAACATGGATGAAGTTGTCGTCTGCCCGCTCACAAAAAATTACACCTTTTCGCTGGCTTGCCGGTTGTTCGTTGGCTTTGAGGAACCAGAAAAACTCTCAAAACTTTCCCACCCGTTCAACGTGTTGGCACGTGGAATCTTCTCATTTCCGATCAACTTTCCGGGCACAGCATTTAACCGAGCGATCAAAGCATCGGAGGAAATAAGGAAGGAGCTGAAAGCCATTATCTGGAAGAGAAAGGTGGATCTTGCAGAGGGAGTGGCAACGCCAACACAAGACATACTTTCTCACATGCTTGTCGCTTGCGATGAGAAGGGTCAGTTCATGAACGATTCTGAAATTGCAGACAAGATTCTCGTGATGTTGCTCGGCGGCCACGACACAGCCAGTTCTGTCTGTACCTCTATCGTCAAATTTCTTGCTCATTTTCCTCAAGTATACAACTCCGTCTACCAAGAACAAATGGAGATCGCAAAATCAAAAGGTGAGGGAGAATCGTTGAACTGGAAAGACATTCAGAAGATGAGGTATTCATGGAACGTAGCCTGTGAAACCATCAGACTTGCACCTCCACTTCAAGGAGCTTTCAGACAAGTCATTCAAGACTTCTCCTTTCATGGATTTTCTATTCCAAAAGGCTGGAAGGTATATTGGAGTGCAAATTCGACCCATCAAAATCCCGATTACTTTGCGGATCCGTACAAATTCGACCCGACAAGATTTGAAGGCAAGGGCCCTGCTCCCTTCACGTTTGTTCCGTTTGGAGGGGGGCCGAGGATGTGTCCGGGAAGAGAGTATGCTCGGCTGGAAATACTAGTTTTCATGCACCATCTGGTGAAGAGGTTCAGATGGGAAATGGTGATTCCGGGGGAGAAGATGACCTTCAATCCAATGCCCACGCCTTCCAAGGGTCTTCCCATTCGCTTACTTTCTCACAAAATAAGTACATGA 1452 46.35 MDYIYLLSLLLVFLPSILLFFVVFQKYRSRQFSGINAPPGSMGYPVIGESLAFLSAGWRGHPENFVLDRMNKLGSAIFKTSIIGVKTVVFCGPSCNKFLFSNENKLVVAWWPDAVYKIFPSTGQTSSIEEAWKLKKLLPQFLNPEAIRGYVEVMDSIADKHFSSFWENMDEVVVCPLTKNYTFSLACRLFVGFEEPEKLSKLSHPFNVLARGIFSFPINFPGTAFNRAIKASEEIRKELKAIIWKRKVDLAEGVATPTQDILSHMLVACDEKGQFMNDSEIADKILVMLLGGHDTASSVCTSIVKFLAHFPQVYNSVYQEQMEIAKSKGEGESLNWKDIQKMRYSWNVACETIRLAPPLQGAFRQVIQDFSFHGFSIPKGWKVYWSANSTHQNPDYFADPYKFDPTRFEGKGPAPFTFVPFGGGPRMCPGREYARLEILVFMHHLVKRFRWEMVIPGEKMTFNPMPTPSKGLPIRLLSHKIST 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38681588 38683904 - Bda014849.1 Bda02g00235 2530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00235 483 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 Pfam Cytochrome P450 38 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Bda02g00235 483 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 9 477 - -
Bda02g00235 483 PANTHER CYTOCHROME P450 26 9 477 - -
Bda02g00235 483 Gene3D Cytochrome P450 27 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00235 483 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00235 Bda-Chr2:38681588 Bda12g00999 Bda-Chr12:41348074 0 dispersed
Bda09g00395 Bda-Chr9:5008364 Bda02g00235 Bda-Chr2:38681588 1.22E-76 dispersed
Bda12g00996 Bda-Chr12:41286837 Bda02g00235 Bda-Chr2:38681588 7.49E-40 dispersed
Bda02g00235 Bda-Chr2:38681588 Bda02g00240 Bda-Chr2:39381632 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00235 K20667 - jre:108989520 677.167