Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00240 ATGGGAGGAGGATATGATCTTTTCATGACAGCTCTTCTCTTTCTCCCCATTTTCTTCTTTTTCATCTTTTCGATCCTCTCCTACAAGCACAGGTCTCAGTTTTCAGGAACCAACAGTCATCCAGGAAATGTAGGGTACCCCATAGTAGGGGAAACCATACAGTTCATCTCCAGTGCTCGCAAAGGTTTCCCTGAGAAGTTTTTCTTGGATCGCATGGCTGAGTATGGCTCTCAATTGTTCAAGACCTCCATTATCGGAATTCCTGTCACTGTTTTCTGCGGTCCTTCTTCTAATAAATTTTTCTTCTCCAATGAAACCAAGCTTGTTGAAGTATGGTGGCCAGATTCTTTCCACAAGCTATTCCCTTCCACCACTCAAACGTCCACCATTGAAGAGGGTAAGAAGTTCAAAAAACTTCTCCCTCAGTTTCTTAAGCCGGAAGCTCTGAAGAGATACGCCGGAATAATGGACGCCGCTGCTCAGCAGCACTTAGCATCGTTCTGGGAGAACAAGGATCGAGTCGTCGTGCTGCCCCTCGCAAAAAAGTTTACGCTCATGTTGGCGTTCCGATTGTTTCTGAGCTACGATGACACCCAAAAAACTGCAAAACTAGTGAAGCCATTGCGAGACTTGACGAATGGAATCTTCTCCTTTCCTCTCAACTTGCCAGGTACAAGTTACGGCAGAGCTATCAAAGCGTCAAACCAGACGAGGAATGAGCTGTCCGCCATAGTGGAGCAGCGGAAGGCGGAGATTATGGACGGAGTTGCATCGCCGACCCAAGACATACTCTCTCATATGCTTACGGCCACTGAAAATGGCTTCCCCTTCGTGAAAGATCCTGAGATCATTGATATGATTATCGCCGTGATAATCGGCAGCTATGAAACTACCAGTTCCATCATTACTTTCATCATCAAGTTTCTGGCCGAGCATACTCATGTATACGAAAGCGTCTACAAAGAACAAATGGAGATAGCCAAATCAAAGGAACCAGGAGAACTGTTGACATGGGAAGACATTCAGAAGATGAAATATTCATGGAACGTAGCATGCGAAACACTCAGACTGGTGCCTCCTGTTCAAGGCACTTTCAGGAAAGTCATTAAGGAATTCACCTTCAATGGCTTCTCTTTTCCAAAAGAGTGGAAGGTATACTGGAATACAAATTCAACCCACAAGAACCCCGACTACTTTCCAGATCCGCATAAATTTGACCCGACGAGATTTGAAGGAAACGGACCAGCTCCGTTCACATTCGTCCCATTTGGAGGAGGGTTGAGGATGTGCCCAGGAAACGAGTATGCACGTCTTCAAATACTTGTGTTCATGTACAACTTGGTAAAGAGGTTCAATTGGGAATTGGTGTATCCCAATGAGACTATCACCTACTTTCCAGCTCCTGTGCTTACAAAGGGACTTCCCATTCGTCTTATTCCACACGAAGCTATTTGA 1455 45.29 MGGGYDLFMTALLFLPIFFFFIFSILSYKHRSQFSGTNSHPGNVGYPIVGETIQFISSARKGFPEKFFLDRMAEYGSQLFKTSIIGIPVTVFCGPSSNKFFFSNETKLVEVWWPDSFHKLFPSTTQTSTIEEGKKFKKLLPQFLKPEALKRYAGIMDAAAQQHLASFWENKDRVVVLPLAKKFTLMLAFRLFLSYDDTQKTAKLVKPLRDLTNGIFSFPLNLPGTSYGRAIKASNQTRNELSAIVEQRKAEIMDGVASPTQDILSHMLTATENGFPFVKDPEIIDMIIAVIIGSYETTSSIITFIIKFLAEHTHVYESVYKEQMEIAKSKEPGELLTWEDIQKMKYSWNVACETLRLVPPVQGTFRKVIKEFTFNGFSFPKEWKVYWNTNSTHKNPDYFPDPHKFDPTRFEGNGPAPFTFVPFGGGLRMCPGNEYARLQILVFMYNLVKRFNWELVYPNETITYFPAPVLTKGLPIRLIPHEAI 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39381632 39383377 + Bda014865.1 Bda02g00240 2535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00240 484 PANTHER CYTOCHROME P450 26 17 479 - -
Bda02g00240 484 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 Pfam Cytochrome P450 43 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Bda02g00240 484 SUPERFAMILY Cytochrome P450 32 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 Gene3D Cytochrome P450 29 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 17 479 - -
Bda02g00240 484 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00240 484 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00240 Bda-Chr2:39381632 Bda12g00999 Bda-Chr12:41348074 0 dispersed
Bda02g00235 Bda-Chr2:38681588 Bda02g00240 Bda-Chr2:39381632 0 proximal
Bda02g00240 Bda-Chr2:39381632 Bda02g00242 Bda-Chr2:39443839 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00240 K20667 - tcc:18589551 597.045