Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00242 ATGATAGCTCTTCTCTTTCTCCCCATTTTCTTCTTTTTCATCTTCTCGATCCTCTCCTACAAGCACAGGTCTCAGTTTTCAGGAACCAACAGTCATCCAGGAAATGTAGGGTACCCCATAGTAGGGGAAACCATACAGTTCATCTCCAGTGCTCGCAAAGGTTTCCCTGAGAAGTTTTTCTTGGATCGCATGGCTGAGTATGGCTCTCAATTGTTCAAGACCTCCATTATCGGAATTCCTGTCACTGTTTTCTGCGGTCCTTCTTCTAATAAATTTTTCTTCTCCAATGAAACCAAGCTTGTTGAAGTATGGTGGCCAGATTCTTTCCACAAGCTATTCCCTTCCACCACTCAAACGTCCACCATTGAAGAGGGTAAGAAGTTCAAAAAACTTCTCCCTCAGTTTCTTAAGCCGGAAGCTCTGAAGAGATACGCCGGAATAATGGACGCCGCTGCTCAGCAGCACTTAGCATCGTTCTGGGAGAACAAGGATCGAGTCGTCGTGCTGCCCCTCGCAAAAAAGTTTACGCTCATGTTGGCGTTCCGATTGTTTCTGAGCTACGATGACACCCAAAAAACTGCAAAACTAGTGAAGCCATTGCGAGACTTGACGAATGGAATCTTCTCCTTTCCTCTCAACTTGCCAGGTACAAGTTACGGCAGAGCTATCAAAGCGTCAAACCAGACGAGGAATGAGCTGTCCGCCATAGTGGAGCAGCGGAAGGCGGAGATTATGGACGGAGTTGCATCGCCGACCCAAGACATACTCTCTCATATGCTTACGGCCACTGAAAATGGCTTCCCCTTCGTGAAAGATCCTGAGATCATTGATATGATTATCGCCGTGATAATCGGCAGCTATGAAACTACCAGTTCCATCATTACTTTCATCATCAAGTTTCTGGCCGAGCATACTCATGTATACGAAAGCGTCTACAAAGAACAAATGGAGATAGCCAAATCAAAGGGACCAGGAGAACTGTTGACATGGGAAGACATTCAGAAGATGAAATATTCATGGAACGTAGCATGCGAAACACTCAGACTGGTGCCTCCTGTTCAAGGCACTTTCAGGAAAGTCATTAAGGAATTCACCTTCAATGGCTTCTCTTTTCCAAAAGAGTGGAAGGTATACTGGAATACAAATTCAACCCACAAGAACCCCGACTACTTTCCAGATCCGCATAAATTTGACCCGACGAGATTTGAAGGAAACGGACCAGCTCCGTTCACATTCGTCCCATTTGGAGGAGGGTTGAGGATGTGCCCAGGAAACGAGTATGCACGTCTTCAAATACTTGTGTTCATGTACAATTTGGTAAAGAGGTTCAAATGGGAATTGGTGTATCCCAATGAGACTATCACCTACTTTCCAGCTCCTGTGCTTACAAAGGGACTTCCCATTCGTCTTATTCCACACGAAGCTATTTGA 1431 45.35 MIALLFLPIFFFFIFSILSYKHRSQFSGTNSHPGNVGYPIVGETIQFISSARKGFPEKFFLDRMAEYGSQLFKTSIIGIPVTVFCGPSSNKFFFSNETKLVEVWWPDSFHKLFPSTTQTSTIEEGKKFKKLLPQFLKPEALKRYAGIMDAAAQQHLASFWENKDRVVVLPLAKKFTLMLAFRLFLSYDDTQKTAKLVKPLRDLTNGIFSFPLNLPGTSYGRAIKASNQTRNELSAIVEQRKAEIMDGVASPTQDILSHMLTATENGFPFVKDPEIIDMIIAVIIGSYETTSSIITFIIKFLAEHTHVYESVYKEQMEIAKSKGPGELLTWEDIQKMKYSWNVACETLRLVPPVQGTFRKVIKEFTFNGFSFPKEWKVYWNTNSTHKNPDYFPDPHKFDPTRFEGNGPAPFTFVPFGGGLRMCPGNEYARLQILVFMYNLVKRFKWELVYPNETITYFPAPVLTKGLPIRLIPHEAI 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39443839 39445560 + Bda014867.1 Bda02g00242 2537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00242 476 SUPERFAMILY Cytochrome P450 24 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 Gene3D Cytochrome P450 21 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PANTHER CYTOCHROME P450 26 10 471 - -
Bda02g00242 476 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 10 471 - -
Bda02g00242 476 Pfam Cytochrome P450 35 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda02g00242 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00242 Bda-Chr2:39443839 Bda12g00999 Bda-Chr12:41348074 0 dispersed
Bda02g00240 Bda-Chr2:39381632 Bda02g00242 Bda-Chr2:39443839 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00242 K20667 - tcc:18589551 599.356