Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00255 ATGCAATTGTCAGTGTTCTTCTTCCTCGGCTGTATAGCCATAGTTATTGCTCTTCTTCTTCTCATAATATTGTTTCGAAAAGCGAGAAGTCCGACAAAGGAGATCAAGTTTATAACTCAGAGTGGATCAAATCAAGCATCTGCAGATATATTTAGTGGGAATCTTCATACCATATCTTACGTTAACTATAACACTTTAAAGAAGGCAACCAAGAATTTCCATCAAGATTTTCTTCTCGGCCGAGGTGGATTTGGTCCTGTTTATCAGGGGAAGCTAGAAGATGGAAGGATAGTAGCCATAAAGAAACTGTCGTTGGAGAAATCACAGCAAGGAGAATCGGAATTTCTAGCCGAGGTGAGGCTAATCACAAGCATCCAACACAAGAACTTACTCCGTTTGATTGGTTGCTGCTCTGATGGACCTCAAAGACTTCTTGTCTATGAGTTCATGAAGAATCAAAGCTTGGACCGCATCATTTATGGGAAAAACAATATATTCTTGGATTGGAATACAAGGTTTCAAATAATAAAAGGAACTGCTAGAGGGTTACAGTATCTACATGAAGATTCGAACGTCAGAATCGTTCATCGGGACATCAAAGCAAGCAATATTCTTCTTGACGAAAAATTTCAACCCAAGATAGGTGATTTTGGTTTGGCTCGGTTCTTCCCCGAAGATCAAGCTTATCTTAGCACGGGCTTTGCTGGAACTTTAGGTTATACGGCACCAGAATATGCAATTAGAGGCGAGTTGTCTGAAAAGGCAGATATTTACAGTTTTGGAGTTCTTATGCTTGAAATCATCAGCAGCAGAAGAAACACTGACCTTACCTTGCCTTCAGAAATGCAATATCTTCCTGAATATGCATGGAAGCTGTGCGAGCGAATGAAGCTAGGTGATTTGGTTGATCCGCGATTGAAGGAAGAAGGGTCATATGTAGAGAACGATATTTTGCATGCAATTCATGTAGCATTTCTATGCCTACAACCACATGCTAATCTTCGTCCGCCAATGTCGGAGATTTTCGCCATGTTAACACGCAACGCGAAAAAGGTTCAAACACCCATAAAACCAATCTTTTTAGATCGAAGACACAGAATGAGTGAAAACAACTCATTTGATATGAGTGAGGTGTGA 1137 40.28 MQLSVFFFLGCIAIVIALLLLIILFRKARSPTKEIKFITQSGSNQASADIFSGNLHTISYVNYNTLKKATKNFHQDFLLGRGGFGPVYQGKLEDGRIVAIKKLSLEKSQQGESEFLAEVRLITSIQHKNLLRLIGCCSDGPQRLLVYEFMKNQSLDRIIYGKNNIFLDWNTRFQIIKGTARGLQYLHEDSNVRIVHRDIKASNILLDEKFQPKIGDFGLARFFPEDQAYLSTGFAGTLGYTAPEYAIRGELSEKADIYSFGVLMLEIISSRRNTDLTLPSEMQYLPEYAWKLCERMKLGDLVDPRLKEEGSYVENDILHAIHVAFLCLQPHANLRPPMSEIFAMLTRNAKKVQTPIKPIFLDRRHRMSENNSFDMSEV 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40167149 40180447 - Bda014896.1 Bda02g00255 2550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00255 378 SMART serkin_6 73 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00255 378 Gene3D Transferase(Phosphotransferase) domain 1 150 363 - -
Bda02g00255 378 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Bda02g00255 378 CDD STKc_IRAK 79 347 - -
Bda02g00255 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bda02g00255 378 PANTHER RECEPTOR-LIKE KINASE 52 358 - -
Bda02g00255 378 Pfam Protein kinase domain 74 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00255 378 Gene3D Phosphorylase Kinase; domain 1 33 149 - -
Bda02g00255 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 358 - -
Bda02g00255 378 ProSiteProfiles Protein kinase domain profile. 73 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00255 Bda-Chr2:40167149 Bda15g00043 Bda-Chr15:1916344 2.82E-99 dispersed
Bda02g00255 Bda-Chr2:40167149 Bda01g02213 Bda-Chr1:57988957 4.06E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69487 PF00069 Pkinase 1.60E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00255 - - hbr:110643064 554.673