Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00262 | ATGGATAATATTGGAGGTGATCTAAATAACTACTGGGATGGCGATACCTTTCTAAGAGCCGAAGAGTTTGACAGCTGGGGATTGGACGAGACTTTATCGAGTTATTATGATTCTAGCTCACCGGATGGTTCTGCGTCGAAAAATATAGTTTCCGAGAGGAATAGGAGGAAGAAGCTAAATGAAAGACTGTTCGCACTCAGAGCTGTAGTTCCTAACATTACAAAGATGGACAAGGCGTCGATAATCAAAGACGCCATAGACTACATCCAAGAGCTTCAAGAGCAAGAAAGAATACTCCAAGGGGAAATAGAAGAGTTAGAGAGCGGAACGGTGTTGAAAGACGATGGAGGTTTCGACTTCGAGAGAAATCTACCGATTCTACTCCGATCAAAGAAATTAAAGACGGAACAGCTCTATGATTCAGGAGGATCTGGAACTTCTCCCATTGAAGTCCTCGATCTGAGTGTTACATTCATAGGAGAGAAAACAATGATGGTGAGCTTGACGTGCACGAAGAGAACCGAAACAACGGTGAAACTGTGCGAGGTGTTTGAGACGATGAATCTGAAAGTCATCGCTGAGACCATCATTGCGGTGTCTGGTAGACTTACCAAGACCCTTTTCATCGAGGTTAGTCGGTCATTATTTGTTAATTATTATTTTAATGTTCTCTTAATCACCTCTAATCTCTCTTTAATTGCAATTGCAAGGTTGTGA | 717 | 41.98 | MDNIGGDLNNYWDGDTFLRAEEFDSWGLDETLSSYYDSSSPDGSASKNIVSERNRRKKLNERLFALRAVVPNITKMDKASIIKDAIDYIQELQEQERILQGEIEELESGTVLKDDGGFDFERNLPILLRSKKLKTEQLYDSGGSGTSPIEVLDLSVTFIGEKTMMVSLTCTKRTETTVKLCEVFETMNLKVIAETIIAVSGRLTKTLFIEVSRSLFVNYYFNVLLITSNLSLIAIARL | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 40879425 | 40880442 | + | Bda014917.1 | Bda02g00262 | 2557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00262 | 238 | PANTHER | TRANSCRIPTION FACTOR BHLH35 | 6 | 212 | - | - | |
Bda02g00262 | 238 | Coils | Coil | 89 | 109 | - | - | |
Bda02g00262 | 238 | Gene3D | - | 38 | 109 | IPR036638 | GO:0046983 | |
Bda02g00262 | 238 | Pfam | Helix-loop-helix DNA-binding domain | 50 | 93 | IPR011598 | GO:0046983 | |
Bda02g00262 | 238 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 43 | 108 | IPR036638 | GO:0046983 | |
Bda02g00262 | 238 | SMART | finulus | 49 | 98 | IPR011598 | GO:0046983 | |
Bda02g00262 | 238 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 6 | 212 | - | - | |
Bda02g00262 | 238 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 43 | 92 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01894 | Bda-Chr1:55110866 | Bda02g00262 | Bda-Chr2:40879425 | 3.01E-57 | dispersed | |
Bda02g00260 | Bda-Chr2:40638117 | Bda02g00262 | Bda-Chr2:40879425 | 5.27E-132 | dispersed | |
Bda02g00262 | Bda-Chr2:40879425 | Bda07g01367 | Bda-Chr7:16512958 | 1.19E-18 | dispersed | |
Bda02g00261 | Bda-Chr2:40695923 | Bda02g00262 | Bda-Chr2:40879425 | 1.36E-125 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15537 | PF00010 | HLH | 2.60E-12 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00262 | - | - | jre:109003087 | 265.003 |