Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00282 CCAATGGATCGTCACCCGGAAAAGAAAGAACATATTTTTCGGTCAAAGCTGCCGGACATTTACATTCCTTCTCATCTTAATTTACATACTTACTGCTTTGAATATGTTTCCAAATTTCGAGACCGTCCTTGCCTGATCGATGGAGCCTCCGACCAGGTTTACACCTACGCCGATGTGCGTTTCACCGCCCGGAGAGTGGCCGCTGGCCTTAGTAAATTGGGCATTAAGAAAGGGGACGTTATAATGATTTTGCTTCAGAATAGTCCGCAGTTCGTCTACGCCTTTCTTGGCGCATCGTACCTTGGCGCAGCCATTACTACCGCCAATCCCTTCTTTACTGCCGGAGAGATTATAAAGCAAGCGAAGGCGGCGAATGCTAAGCTCATCGTCACTCAGGCGGCCCATGTGGACAAAGTAAAGGATTTCTCCGAAGAAAACAACGTAAAAATCGTGTTTACCGACTCTTCTCCTGCAGGATTCATAAACTTCTCTGACCTGACATCAGCTGACGAAACGGAAGTTCCGGAAGTCGTCATTGACCCGGACGACACGGTCGCGCTCCCGTTTTCATCGGGCACCACAGGGCTTCCAAAAGGTGTCATGCTGACCCACAAATGCATGGTCACCGGCGTCGCTCAACAAGTCGACGGGGAAAATCCTTCGCTGAATTTCAGCAGTTCCGACGTCCTTCTGTGCGTTCTTCCATTGTTTCATATCTACTGCCTTAGCTCGATCATGCTGTCCGGCCTCCGAGTAGGGGCGGCAATATTGATAATGCCGAGATTCGAGATAAACAGATTGTTTGAACTTGTCGAGAAATATAAAGTGACAGTCGCTCCGTTCGTCCCTCCGATCATCTTGGCTATTGCGAAAAACAATGACTCCGGAAATTACGATCTATCATCAGTAAAAGTGGTGATGTCCGGCGCTGCACCACTGGGGCAGGAGCTTGAAGATGCAGTTAGGTCTAAGCTTCCCAATGCCAAGCTCGGACAGGGGTATGGAATGACAGAGTCTGCGTCAGCCATATCATTGTCTTTGGCTTTTGCCAAACAACCATTCGAGGTGAAACCAGGAGCTTGCGGGACCGTCATAAGAAATGCAGAGATGAAGATCATAGACCCTGAAACTGGTGCTTCTCTTCCTAAAAATCACGCCGGAGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGATACTTGAATGACAAGGAGGCCACGGAGAGAACGATAGACGAGGAAGGATGGCTGCACACCGGCGACTTAGGCTACGTCGATGATGATGATGAGGTCTTCATCGTCGATAGATTGAAGGAAATGATCAAATACAAAGGCTTTCAAGTCGCTCCCGCCGAACTCGAAGCTTTGCTCATCGCACACCCTCACATTTCGGACGGAGCAGTCGTCTCCATGAAAGATGAAGCTGCAGGAGAGGTTTCTGTTGCATTTGTTGTCAGATCCAACGGTTCAAACGTGTCTGAAAATGAAATCAAGAACTATATTTCAAATCAGGTTGTATTTTATAAGAGAATTAACAGGGTGTTCTTCGTAGACTCTATTCCTAAATCTCCTGCTGGCAAGATCTTGCGTAAAGACCTAAGAGCACGCCTTGCAGCCCTTCCAAAGAACTAA 1632 47.79 PMDRHPEKKEHIFRSKLPDIYIPSHLNLHTYCFEYVSKFRDRPCLIDGASDQVYTYADVRFTARRVAAGLSKLGIKKGDVIMILLQNSPQFVYAFLGASYLGAAITTANPFFTAGEIIKQAKAANAKLIVTQAAHVDKVKDFSEENNVKIVFTDSSPAGFINFSDLTSADETEVPEVVIDPDDTVALPFSSGTTGLPKGVMLTHKCMVTGVAQQVDGENPSLNFSSSDVLLCVLPLFHIYCLSSIMLSGLRVGAAILIMPRFEINRLFELVEKYKVTVAPFVPPIILAIAKNNDSGNYDLSSVKVVMSGAAPLGQELEDAVRSKLPNAKLGQGYGMTESASAISLSLAFAKQPFEVKPGACGTVIRNAEMKIIDPETGASLPKNHAGEICIRGNQIMKGYLNDKEATERTIDEEGWLHTGDLGYVDDDDEVFIVDRLKEMIKYKGFQVAPAELEALLIAHPHISDGAVVSMKDEAAGEVSVAFVVRSNGSNVSENEIKNYISNQVVFYKRINRVFFVDSIPKSPAGKILRKDLRARLAALPKN 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41425929 41428517 + Bda014946.1 Bda02g00282 2577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00282 543 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Bda02g00282 543 CDD 4CL 22 533 - -
Bda02g00282 543 Gene3D - 3 437 IPR042099 -
Bda02g00282 543 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Bda02g00282 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 537 - -
Bda02g00282 543 Pfam AMP-binding enzyme 35 443 IPR000873 -
Bda02g00282 543 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 8 537 - -
Bda02g00282 543 Gene3D - 438 539 IPR045851 -
Bda02g00282 543 SUPERFAMILY Acetyl-CoA synthetase-like 12 540 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01926 Bda02g00282 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01922 Bda-Chr1:55391381 Bda02g00282 Bda-Chr2:41425929 0 dispersed
Bda01g01926 Bda-Chr1:55508683 Bda02g00282 Bda-Chr2:41425929 0 dispersed
Bda02g00282 Bda-Chr2:41425929 Bda03g01352 Bda-Chr3:48786072 0 dispersed
Bda02g00282 Bda-Chr2:41425929 Bda04g00768 Bda-Chr4:57173261 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00282 K01904 - jre:108998879 804.668