Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00295 | ATGGAACTGAAGAAGGAGAAGCTCGTTAGGTTTTATTCAGATCGAAGTAAAAAACAGAGAGAAGCATCGTCGAGAGAAATCGAACTTCTGCATCCAGAACAATCATTGTCGAACAAGGTTTCATCATCTTCAATCCGGAAGAATGATTACGGGCCTGTGGGACACAAAAATCGATTCACCGAAACTAATCAAACTGGCAAATTTAAGGTCTTTCCGGGAGATCAAGAGCCATTACGCAAGAGAATATTCGATCCGGGAAGCGAAATTGTGGTGCAATGGAACCAGGTTTTCATCGTCGCCTGCTTGGTGGCGCTTTTTGTCGATCCGTTTTATTTTTACTTGCCTACTTTGGGAGGAAATACGAGTTCATCGTGTGTGCACACTGACATGAATCTACGAATAGTGGTGACGTTATTTCGGACTTTCGCCGACATTTTCTATCTCCTCCATATGGTCATCAAGTTTCGGACTGCATATGTCTCTCCGACCTCCCGTATTTTTGGAAGAGGTGAACTTGTCATGGACCCGAAGAAGATCGCATGGAGGTATATTCGATCCGACTTTTTCATCGATCTCATTGCCACTCTGCCTCTTCCTCAGATGGTCATCTGGTTTATCATACCAGCGACGAGAAGCCCTCAAACGGATCATAATAACAATGCTCTTGCCCTCATCGTGCTCTTTCAATACGTTCCGAGATTATATTTGATTTTTCCGTTAAGTTCAGAGATAATTAAAGCAACAGGAGTTGTGACGAAAACAGCATGGGCCGGAGCAGCTTATAACCTGCTGCTCTACATGTTGGCTAGCCATGTATTAGGGGCGGCCTGGTATTTGCTATCTATTGACCGGTACACTTCTTGCTGGAAATCGATGTGCAGAAAGAAAGAGTTTAACCCTATAAAATGTCTGCCTACTTACTTGGATTGTGATGTTTTCAATCACGATGACCGAAAAATTTGGGCGAATTCCACGACCGTGTTTAAGAACTGCGATCCTGATGGGGGAACTTTCAATTATGGCATTTTTGAAGATGCATTGTCGAAAGAGGTTGTGTCGACGAACTTTATGAGGAAATATTTCTATTGCTTATGGTGGGGTTTACAAAACCTGAGTTCGTACGGGCAAAATTTGGGTACAAGCACTTTCATCGGAGAGACCTTATTCGCCATTCTCATCGCCATCTTGGGTCTTGTTTTATTTGCTCATCTAATTGGGAATATGCAGACTTATTTGCAATCCATCACCATTAGGCTCGAGGAATGGCGACTCAAGCGAAGAGACACCGAGGAGTGGATGAGACACCGGCAACTTCCCGGGGATCTGAAACAACGAGTGCGGCGTTTTGTACAATATAAATGGCTCGCCACTCGAGGGGTCGATGAAGAAGCCATATTGCATAGCTTACCAGCTGATCTTCGTCGCGATATTCAGAGACACCTTTGCTTAGACCTCGTTCGACGAGTCCCTTTCTTCTCACAAATGGACGATCAGCTGCTAGATGCAATATGCGAGCGGCTAGTATCCTCGCTAAGCACTCAAGGCACTTACATCGTCCGAGAGGGTGATCCTGTGACTGAAATGCTTTTTATAATCCGGGGAAGGCTGGATAGCTCGACGACCAACTGGAGGTCGGACCGGTTTCTTCAACTTCCATAA | 1659 | 44.91 | MELKKEKLVRFYSDRSKKQREASSREIELLHPEQSLSNKVSSSSIRKNDYGPVGHKNRFTETNQTGKFKVFPGDQEPLRKRIFDPGSEIVVQWNQVFIVACLVALFVDPFYFYLPTLGGNTSSSCVHTDMNLRIVVTLFRTFADIFYLLHMVIKFRTAYVSPTSRIFGRGELVMDPKKIAWRYIRSDFFIDLIATLPLPQMVIWFIIPATRSPQTDHNNNALALIVLFQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSIDRYTSCWKSMCRKKEFNPIKCLPTYLDCDVFNHDDRKIWANSTTVFKNCDPDGGTFNYGIFEDALSKEVVSTNFMRKYFYCLWWGLQNLSSYGQNLGTSTFIGETLFAILIAILGLVLFAHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPGDLKQRVRRFVQYKWLATRGVDEEAILHSLPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNWRSDRFLQLP | 552 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42112849 | 42116216 | + | Bda014969.1 | Bda02g00295 | 2590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00295 | 552 | Pfam | Ion transport protein | 93 | 417 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Bda02g00295 | 552 | Gene3D | - | 95 | 416 | - | - | |
Bda02g00295 | 552 | PRINTS | EAG/ELK/ERG potassium channel family signature | 151 | 160 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bda02g00295 | 552 | PRINTS | EAG/ELK/ERG potassium channel family signature | 386 | 397 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bda02g00295 | 552 | PRINTS | EAG/ELK/ERG potassium channel family signature | 454 | 461 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bda02g00295 | 552 | PRINTS | EAG/ELK/ERG potassium channel family signature | 404 | 413 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bda02g00295 | 552 | PRINTS | EAG/ELK/ERG potassium channel family signature | 268 | 278 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bda02g00295 | 552 | SUPERFAMILY | cAMP-binding domain-like | 421 | 540 | IPR018490 | - | |
Bda02g00295 | 552 | SUPERFAMILY | Voltage-gated potassium channels | 87 | 413 | - | - | |
Bda02g00295 | 552 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED | 45 | 542 | - | - | |
Bda02g00295 | 552 | Gene3D | Jelly Rolls | 489 | 551 | IPR014710 | - | |
Bda02g00295 | 552 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 491 | 537 | IPR000595 | - | |
Bda02g00295 | 552 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 45 | 542 | - | - | |
Bda02g00295 | 552 | Gene3D | Helix hairpin bin | 419 | 482 | - | - | |
Bda02g00295 | 552 | CDD | CAP_ED | 491 | 542 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00295 | Bda-Chr2:42112849 | Bda12g00522 | Bda-Chr12:7998729 | 0 | dispersed | |
Bda11g00884 | Bda-Chr11:8683641 | Bda02g00295 | Bda-Chr2:42112849 | 0 | transposed | |
Bda02g00295 | Bda-Chr2:42112849 | Bda03g00048 | Bda-Chr3:613252 | 5.52E-12 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00295 | K05391 | - | vvi:100250129 | 866.685 |