Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00318 CAGGTTTTTCAAGTTCCAGATGTCATTTTAAAACTCAAGCAAGAGATAGAAGCTGAATTTTTTGGTGATGATCAAACTTGGAACCGCGGAGATATCAATTCACTAAATCAGCCGCAGCATCGGTATTCTGAACCAGATAATCGAGACTGGCGTAGCAGGTCTACAAATATAACCTCCCCAGGAGAGGATAGGTCCAGGGATACATTTCATGATAGAGATTTTGGTGGCCGATTTGACTCAAGAGACCAAGAGGCAAATCGCCACGACCAACGTAACAATCAGTCTTCGAAGGCCAACGCCTCTTTGGATGAAGGGGTGGGAGCTGCTACTGCTCTAGTCAAGGCAGAAGTACCATGGTCAGCGAGGAAGGGGAACATATCTGAAAAGGAACGTGTCCTGAAGACTGTAAAAGGGATCTTGAATAAGCTGACACCCGAAAAGTTTGATGTCCTCAAAGGTCAGCTGATTGATTCCGGCATTACTTCAGCTGATATTTTGAAGGATGTTATTTCATTGATATTTGACAAAGCTGTGCTTGAGCCAACATTTTGCCCAATGTATGCACTTTTGTGCTCTGATCTTAATAAAAAGCTCCCACCATTTCCATCTGACGAACCAGGTGGAAAAGAAATTACTTTTAAGCGAGTCCTCTTAAATATCTGCCAGGAGGCTTTTGAAGGTTCTGATAAATTGCGGGAAGAAGCTAGACTAATGATTGCCCCTGAACAGGAAATGGAACGAAAGGATAAAGAAAGACTGATTAAGCTTCGAACACTTGGAAATATTAGGTTAATTGGGGAGCTACTAAAGCAGAAGATGGTGCCTGAGAAGATTGTTCATCACATTGTTCAAGAACTTTTAGGAAATGATAATAATACCTGTCCAGCTGAAGAAAATGTCGAGGCAATCTGTCAGTTTTTTAACACTATAGGTAAGCAACTGGATGAAAGCCCAAAATCACGTCGCATAAGTGATTCGTACTTTAGTCGATTGCGAGAATTGACCACAAACTCCCAGATGGCCCCACGATTGCGATTCATGGTTCGTGATGTACTTGATTTGCGAGCTAACAAGTGGGTTCCCCGTCGAGAAGAGGTAAAAGCTAAAACCATCAATGAAATACATTCAGAAGCTGAAAAAACTCTCGGATTGCGTCCTGGTGCAACTGCAAGCATTAGACATAATCGTGGGATTGTGTCTAATCTGCCAGGAGTTGCAAGCCCAACTGGATATCCTATAAATGGACCTGGTTTGGGCGGTATGATGCCTGGAATGCCTGGAACCAGGAAGATGCCTGGGATGCCCGGACTCGATAATGACAGCTGGGAGGTGCAGAGGTCTAGATCAACGCCTAAGGCTCAAGGATCCCCCATGCAACTTGCTGGCCGGGGCACAAATCCATTGACGGCCAAATCATCGGCATTAAACACAAGGCTTTTACCTCAAGGTAGTGGTGGGCTCCTCAGTGGGAAAACTAGTGCCCTTCTGCAAGGTAGTAGCCCATCTCCTCCCTCCCCCACCAATATTGGCTATGTTTCTGAGCCTTCTCAAGCATTTCGAACTGGTCCTCCATTATTTACACCTCAAATTTCTGAGCGGCCACAGGCCCCACCTGCAAGTTTTAATCTTGATAATCTGAGGAAGAAGACTTTGTCACTTCTAGAAGAATATTTCAGCATTAGGATTATTGATGAAGCTGTACTGTGTGTGGAGGAGCTTAAGGCTCCAAATTATCATCCTGAGGTTGTAAAGGAAGCCATTTCCACGGCTCTGGAGAAAAGTCCGCCCTGTGTCGAAGCTGTCTCAAAGCTTATTGAGTGTTTATATGCAAGGAAGATTCTTACCATCAGAGACGTAGGGACTGGTTGCTTGCTTTATGCCTCTATGATTGATGATATAGCCATCGATTTGCCAAAAGCTCCTAATAATTTTGGTGAAATTATAGGGAGACTAGTTTTGTCTGGAAGCTTGAATTTCAAGGTGGTTAAGGAGGTCCTTGAGAAGGTTGAAGACGGCTTCTTCCGAAAAGTTATTCTCGATGCGGCAGTGAGGACAGTCAATAATAGTTCCTCGGGAAAAGATGTGATGGATTCCCAGGGCTCTGATATCGAGTCCTGTCGGAAGCTTCTCGATTAA 2136 44.29 QVFQVPDVILKLKQEIEAEFFGDDQTWNRGDINSLNQPQHRYSEPDNRDWRSRSTNITSPGEDRSRDTFHDRDFGGRFDSRDQEANRHDQRNNQSSKANASLDEGVGAATALVKAEVPWSARKGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNKKLPPFPSDEPGGKEITFKRVLLNICQEAFEGSDKLREEARLMIAPEQEMERKDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGNDNNTCPAEENVEAICQFFNTIGKQLDESPKSRRISDSYFSRLRELTTNSQMAPRLRFMVRDVLDLRANKWVPRREEVKAKTINEIHSEAEKTLGLRPGATASIRHNRGIVSNLPGVASPTGYPINGPGLGGMMPGMPGTRKMPGMPGLDNDSWEVQRSRSTPKAQGSPMQLAGRGTNPLTAKSSALNTRLLPQGSGGLLSGKTSALLQGSSPSPPSPTNIGYVSEPSQAFRTGPPLFTPQISERPQAPPASFNLDNLRKKTLSLLEEYFSIRIIDEAVLCVEELKAPNYHPEVVKEAISTALEKSPPCVEAVSKLIECLYARKILTIRDVGTGCLLYASMIDDIAIDLPKAPNNFGEIIGRLVLSGSLNFKVVKEVLEKVEDGFFRKVILDAAVRTVNNSSSGKDVMDSQGSDIESCRKLLD 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43037399 43041053 + Bda015006.1 Bda02g00318 2613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00318 711 ProSiteProfiles MI domain profile. 545 667 IPR003891 -
Bda02g00318 711 SUPERFAMILY ARM repeat 541 698 IPR016024 -
Bda02g00318 711 SMART if4_15 133 358 IPR003890 GO:0003723|GO:0005515
Bda02g00318 711 Pfam MA3 domain 546 657 IPR003891 -
Bda02g00318 711 MobiDBLite consensus disorder prediction 63 91 - -
Bda02g00318 711 SMART ma3_7 546 658 IPR003891 -
Bda02g00318 711 Gene3D - 540 707 - -
Bda02g00318 711 MobiDBLite consensus disorder prediction 25 102 - -
Bda02g00318 711 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 2 710 - -
Bda02g00318 711 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 710 IPR045208 GO:0003743
Bda02g00318 711 MobiDBLite consensus disorder prediction 27 41 - -
Bda02g00318 711 MobiDBLite consensus disorder prediction 442 518 - -
Bda02g00318 711 MobiDBLite consensus disorder prediction 419 518 - -
Bda02g00318 711 SUPERFAMILY ARM repeat 125 361 IPR016024 -
Bda02g00318 711 Gene3D - 124 359 - -
Bda02g00318 711 Pfam MIF4G domain 133 358 IPR003890 GO:0003723|GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00318 Bda09g00900 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00318 Bda-Chr2:43037399 Bda09g00900 Bda-Chr9:25213730 0 dispersed
Bda02g00311 Bda-Chr2:42762270 Bda02g00318 Bda-Chr2:43037399 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00318 K03260 - twl:120005568 942.954