Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00332 ATGGCGTTTGATCAGAATTTGATTCCCAAAGACTTGCGACCATTAAACGATGCTAGAACTGTGGTTGAGGAGCCTCGTATTACACCGTCGGCAACTGCCCTTCGAGGTTACAAAGGGCATATTCCGAACGCAGTTAGTGATGTTGTGAGTCATAACTCTGTACCAGTAATCTACCCTGCTATGGTCTCTGATGTAGGATCTACAGTCACGGGGTATGGAAATGTAGTGCAAGGTGTTTCCCCATGGTGCCCCCGAGCCCCTGCTCCTGCCTCATTCGTCCAACCAGCTATGGATCCTTCTCTTAGATTGGCTTACAGTGTAAATCCCAATACTTTTAACCATCTTCGTCCCAATGGTGTCGATGCTGGCAGTGGTGGTTTGAGTTCTAGTCCAAACTTGAGTAATCAAATTGTTGGTAATTGCAACGACGTCCTGACCAGTGTTGGTTCTAGCTCCAACTGGTGTAACCGGGTCAATGGCTCTGTTGTAGATGAAACTAGTGGTGATTCAATTGGTTCTCTTGGCAATGTAATCAGCCGGGACAGTGGAGCTGATCGGTTGAGCGATGAGGGTGGGGATGGTTCGTTGTCAGGGAAAATAAAGTTTTTGTGCAGTTTTGGTGGCAAGATCTTGCCCAGACCAAGTGACAGAATGCTTAGATACGTGGGAGGACAAACGAGAATAATTAGTGTTAGAAGAGACGTGAGTTTCGATGAGCTTGTTCAAAAGTTTTTAGATGCATATGGGCAGCCAGTAGTTATTAAGTATCAACTCCCCGGAGAAGATCTCGATGCGTTAGTTTCCGTTTCCTGCCCTGACGATCTTGATAATATGCTCGATGAATATGAAAAATTGATTGAGATGTCATCAGATGGGTCTCCTAAGTTAAGGGTGTTTTTGTTCTCTGCTTCAGAACTCGATTATTCTGGCATGGAACCCTTTGTTGATTTCCATGATTGTGGACAGAAATATGTCGATGCTGTGAATGGGCTGACGGATGGGGTTGGTGGTGGCATTAGTACAAGAAAGGAGAGCACAGCAAGTGCCACTTCTACTCATAATTCCGACTTTAGTGGAACCGATCCCATCGATGGCTCGAACCATGGTCAAGGGAATGAGACCATCGGGTCATCTCCCAGAAGAAATTCAAGGCTGTCAAACGACACTACTCCGAGAGTAAATGTCAATCCCTTCCCTGTGGCTTTACCCGATGCTTCTACAGTTTCATTGGGCATTCCGGTGGTTAATTCTGGTCTTCTCCAAGCTACGTCTTCTCAGCCAGAGGTTCAGCTAGATCGGTCTGTGCCGATCTCTGAATTGGGATTGCATCAACCTGGAACTGACCTTCCACCCCCTGTATCTTACCCTCATTCTTATCTCAATCCTCACCAAGGGACAGGCATTGATTATGTACAGATTGCTTCCCCTATGGCGTATCCAAATCCTCAAGTTTTAGGGGCAGCTGCTCCAGTGTTAACTCAGCCACAGATTCATGATAATATCACTGGACTTGCTCCTTCCCAGTTGTTTCAGCCAATCCACATGACAATGGTGGCTCCCTCGTATGCTCAAATCGGTATGAGCCCAAATGTGGTTCTGCCATCAGTTCAGCCTCAACACATCCAGCTTGATCATTATGTTCAAGACAGTCCATTCATGCCCAGGGCCCTTCAACTTCCGGCCGAGCAAAGCTATGGCTCGTACCAGGTTCCAACCCCGACGACGCTACTAGAAGGTGGATTTATTCCGCACCCGGTACCTTCTGCTAATCGAGTAATTTTCTCTGACGGATTGGTACCTCATCAGCAGGTATTGTTTGATCAGAAATTTCCAAGGATGGAGAACTGTTATATGTGTCAGCATGCTTTACCTCATACACATTATGATACTTTGGCACAGGATAAAAGAGACAGTGGTGCCAACCTTTTATCTGAAGCTAACTCCAATTTTCGTAGCCTACAAGTGGACAGTAATTTAAAAGCTCGGCAAATTGGAACTGGAGCATTAGAAGAAAACATTTTTGAACTGGGAGCTGGAGCTCGAACCAATGTAGATGGTCAAGTTGGTACATCTCCATTGGCGACGGATGCCTGCTCACGAAATCTTGGGGTGAATAATGAAAATGAAAGAATCCCTCCCAACCTCGAAGGTATCATTGGGAGAGCAAGTGAGGGGCAGTCCCCTTATGTGGCATTTGTTGGCACTCCTCCTCAATTCTTTCAAGATGATGTTCTTCAGCCGAATCCTGAGCTACTGCCTTATCCAGTCAGACAGAACACCAGACCTACCACCAATCACGATGATTGTTCAGTCAGAGGTATCTCTACCAAGACTTTTGAGAATGTTATTCAGGGATCTCCAGAAGAATATTCTGATAAACATCCTGGCCCTCTTCTGAGTGAAGATTATCTGGATGTACCCATTTCTTATGATCGTCTGGGAATAACTGATGAGAATGTGAAAATGGAAGATAATTTTCTTTGGAATTCAAAATCAGTTGTAGAGATGGATGTTCGGTTAGATGACGAAATTAGCAGGCGCAAAATGGCTCTGGATACTAATCATAATAGACCACTAGGAGCTTTGTCATCAGAATTGGTGAACATGGGAAAATTTCAACCAGTCCAGCCTTCTGAGGTTGCAAAATTATCTAGTTTGGATTTCCCGGGACAGCATCCGCAGGCAAATATTGGAATTCATCCGTTGGAGTGTGACAAATATTTTCATGGACGAAATCCTCAGTTGTTGAGTGTCGGGCTTAACCAACAAAGTGATAACATTCCATCACTCTTTCACTCCAAGGTTGCATCCAGTGATGTTGAAGCTGTTGCTTTGAGAGGAGATGAACTCCCCTGCAAATTTCCCCACAGTAGACATGGAGATGTTCCGGATTCCTCAAATTCACTGTTTAGTGAGCATGATCCTTGGAATTTTAACCACGACCCACGACGTTGTCTGCCTCCAAAACCTACAAAAATTCTGTCCAAAAAGGATTTATATGCTAAGGAACCCTTCATAGAAAACCATTTGGGTACTAATAAGGAGCAACTCAATCAAGAATGCATACTCAACGATCCAATTCATCAGCCATTGGGCTCAGCAGAAGAACAAATCAAGCAAGATCTTCAAGCTGTTGCAGAGTGTGTTGCTGCTTCTGTTCTTCAGTCAGCTTCATCCTCCAATGCAGACGTCCACGAAAAAATCCAATCCATTTATGATGCTGATGAAGCTGTAGTGGTTCAAAATAGCAATATAGACAAGGAGCCTAAAACGACACTGCTAGACGGAGCAAATCTTGGTTTCCCAGTTTCTGATGGATTTGGTCGTTTACAGATCATAAGGAACAGTGACCTCGAGGAGATGAAAGAACTCGGTTCTGGTACATATGGCACCGTTTATCATGGGAAATGGAGGGGGACAGATGTTGCCATCAAAAGAATTAACGAGAGGTGCTTTGCTGGAAAACCTTCAGAAAAGGAACGCTTGAGAGAGGATTTCTGGAATGAAGCAATTAAACTTGCTGACTTGCATCATCCAAACGTGGTAGCTTTCTACGGTGTCGTGCTTGATGGGCCCGGTGCATCTGTGGCAACAGTCACGGAGTATATGGTCAATGGATCGCTAAGAAATGCTTTGCAGAAAAATGAGAAGAGTCTTGACAAGCGCAAACGTCTCTTGATTGCAATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAACATAGTGCATTTTGATTTGAAAAGTGATAACTTATTGGTCAATCTTAGAGACCCTCATCGGCCGATATGCAAGGTTAGCACTAATGATATTTTCTTTAAGGCATACTATACATCAACAAGATCGATTATTATCCGATCATATAAGTTCAAATTCAACTTCTTCTCAGTTGATGTATTCTCATTCGGGATCGTAATGTGGGAACTTCTTACTGGAGAGGAACCATATGCCGATATGCACTATGGCGCCATAATTGGCGGTATCGTGAGCAACACATTGCGGCCACCTGTGCCTGAATATTGTGATGCAGAATGGAAATCAATGATGGAGAGGTGCTGGTCTACCGAGCAATTTGAGAGGCCGAGTTTCACGGAGATAGCCAACGAGTTACGATCAATGGCCGCTAAACTTCCTCCGAAAGGACAGAATCAACAACTTCCCTCAACCCATATACTAAGATGA 4185 44.37 MAFDQNLIPKDLRPLNDARTVVEEPRITPSATALRGYKGHIPNAVSDVVSHNSVPVIYPAMVSDVGSTVTGYGNVVQGVSPWCPRAPAPASFVQPAMDPSLRLAYSVNPNTFNHLRPNGVDAGSGGLSSSPNLSNQIVGNCNDVLTSVGSSSNWCNRVNGSVVDETSGDSIGSLGNVISRDSGADRLSDEGGDGSLSGKIKFLCSFGGKILPRPSDRMLRYVGGQTRIISVRRDVSFDELVQKFLDAYGQPVVIKYQLPGEDLDALVSVSCPDDLDNMLDEYEKLIEMSSDGSPKLRVFLFSASELDYSGMEPFVDFHDCGQKYVDAVNGLTDGVGGGISTRKESTASATSTHNSDFSGTDPIDGSNHGQGNETIGSSPRRNSRLSNDTTPRVNVNPFPVALPDASTVSLGIPVVNSGLLQATSSQPEVQLDRSVPISELGLHQPGTDLPPPVSYPHSYLNPHQGTGIDYVQIASPMAYPNPQVLGAAAPVLTQPQIHDNITGLAPSQLFQPIHMTMVAPSYAQIGMSPNVVLPSVQPQHIQLDHYVQDSPFMPRALQLPAEQSYGSYQVPTPTTLLEGGFIPHPVPSANRVIFSDGLVPHQQVLFDQKFPRMENCYMCQHALPHTHYDTLAQDKRDSGANLLSEANSNFRSLQVDSNLKARQIGTGALEENIFELGAGARTNVDGQVGTSPLATDACSRNLGVNNENERIPPNLEGIIGRASEGQSPYVAFVGTPPQFFQDDVLQPNPELLPYPVRQNTRPTTNHDDCSVRGISTKTFENVIQGSPEEYSDKHPGPLLSEDYLDVPISYDRLGITDENVKMEDNFLWNSKSVVEMDVRLDDEISRRKMALDTNHNRPLGALSSELVNMGKFQPVQPSEVAKLSSLDFPGQHPQANIGIHPLECDKYFHGRNPQLLSVGLNQQSDNIPSLFHSKVASSDVEAVALRGDELPCKFPHSRHGDVPDSSNSLFSEHDPWNFNHDPRRCLPPKPTKILSKKDLYAKEPFIENHLGTNKEQLNQECILNDPIHQPLGSAEEQIKQDLQAVAECVAASVLQSASSSNADVHEKIQSIYDADEAVVVQNSNIDKEPKTTLLDGANLGFPVSDGFGRLQIIRNSDLEEMKELGSGTYGTVYHGKWRGTDVAIKRINERCFAGKPSEKERLREDFWNEAIKLADLHHPNVVAFYGVVLDGPGASVATVTEYMVNGSLRNALQKNEKSLDKRKRLLIAMDAAFGMEYLHSKNIVHFDLKSDNLLVNLRDPHRPICKVSTNDIFFKAYYTSTRSIIIRSYKFKFNFFSVDVFSFGIVMWELLTGEEPYADMHYGAIIGGIVSNTLRPPVPEYCDAEWKSMMERCWSTEQFERPSFTEIANELRSMAAKLPPKGQNQQLPSTHILR 1394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43576041 43581077 - Bda015035.1 Bda02g00332 2627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00332 1394 PANTHER SERINE-THREONINE PROTEIN KINASE 1298 1378 - -
Bda02g00332 1394 Gene3D Transferase(Phosphotransferase) domain 1 1206 1391 - -
Bda02g00332 1394 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 1298 1378 - -
Bda02g00332 1394 SUPERFAMILY Protein kinase-like (PK-like) 1111 1370 IPR011009 -
Bda02g00332 1394 CDD PB1_UP2 203 301 - -
Bda02g00332 1394 CDD STKc_MAP3K-like 1124 1371 - -
Bda02g00332 1394 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 168 1267 - -
Bda02g00332 1394 ProSitePatterns Protein kinases ATP-binding region signature. 1124 1155 IPR017441 GO:0005524
Bda02g00332 1394 Pfam Protein tyrosine and serine/threonine kinase 1119 1371 IPR001245 GO:0004672|GO:0006468
Bda02g00332 1394 ProSiteProfiles Protein kinase domain profile. 1118 1375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00332 1394 SUPERFAMILY CAD & PB1 domains 215 310 - -
Bda02g00332 1394 MobiDBLite consensus disorder prediction 339 392 - -
Bda02g00332 1394 Gene3D Phosphorylase Kinase; domain 1 1111 1205 - -
Bda02g00332 1394 SMART PB1_new 214 303 IPR000270 GO:0005515
Bda02g00332 1394 PRINTS Tyrosine kinase catalytic domain signature 1342 1364 IPR001245 GO:0004672|GO:0006468
Bda02g00332 1394 PRINTS Tyrosine kinase catalytic domain signature 1237 1255 IPR001245 GO:0004672|GO:0006468
Bda02g00332 1394 PRINTS Tyrosine kinase catalytic domain signature 1200 1213 IPR001245 GO:0004672|GO:0006468
Bda02g00332 1394 PRINTS Tyrosine kinase catalytic domain signature 1298 1320 IPR001245 GO:0004672|GO:0006468
Bda02g00332 1394 PANTHER SERINE-THREONINE PROTEIN KINASE 168 1267 - -
Bda02g00332 1394 SMART serkin_6 1118 1374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00332 1394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1243 1255 IPR008271 GO:0004672|GO:0006468
Bda02g00332 1394 Gene3D - 220 303 - -
Bda02g00332 1394 Pfam PB1 domain 219 301 IPR000270 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01930 Bda02g00332 CCT
Bda02g00332 Bda11g00996 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00332 Bda-Chr2:43576041 Bda06g00238 Bda-Chr6:4222295 1.56E-37 dispersed
Bda08g00415 Bda-Chr8:4239158 Bda02g00332 Bda-Chr2:43576041 1.45E-12 dispersed
Bda02g00332 Bda-Chr2:43576041 Bda02g00334 Bda-Chr2:43603977 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69491 PF07714 PK_Tyr_Ser-Thr 5.00E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00332 - - qlo:115977166 1317.37