Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00334 ATGGCGTTTGATCAGAATTTGATTCCGACAGACTTGCAACCATTAAACGTGGCTAGAACTGTGGTTGAGGAGCCTCGTATTACACCGCCGGCAACTGCCCTTCGAGGTTACAAAGGGCATATTCCGAACGAAGTTTGTGATGTTGTGAGTCATAACTCTGTACCAGTAATCTACCCTGCTATGGTCTCTGATGTAGGATCTACAGCCACGGGGTATGGAAATGTAGTGCAAGGTGTTTCCCCATGGTGCCCTCGAGCCCCTGCTCCTGCCTCATTCGTCCAACCAGCTATGGATCCTTCTCTTAGATTGGCTTACAGTGTAAATCCCAATACTTTTAACCATCTTCTTCCCAATGGTGTCGATGTTGGCAGCGGTGGTTTGAGTTCTAGTCCAAACTTGAGTAATCAAATTGTTGGTAATTGCAACGATGTCCTGGCCAGTGTTGGTTCTAGTTCCAACTGGTGTAATCGGGTCAATGGCTCTGTTGTAGATGAAACTAGTGGTGATTCAATTGGTTCTCTTGGCAATGTAATCAGCCGGGAGAGTGGAGCTGATCGGCTGAGCGATGAAGGTGGGGATGGTTCGTTGTCAGGGAAAATAAAGTTTTTGTGCAGTTTTGGTGGCAAGATCTTGCCCAGACCAAGTGACAGAATGCTTAGATACGTGGGAGGACAAACGAGAATAATTAGTGTTAGAAGAGACGTGAGTTTCGATGAGCTTGTTCAAAAGTTTTTAGATGCATATGGGCAGCCAGTAGTTATTAAGTATCAACTCCCTGGAGAAGATCTCGATGCGTTAGTTTCCATTTCCTGCCCCGACGATCTTGATAATATGCTCGATGAATATGAAAAATTGATCGAGATGTCATCAGATGGGTCTTATAAGTTAAGGGTGTTTTTGTTCTCTGCTTCAGAACTCGATTATTCTGGCATGGAACCCTTTGTTGATTTCATTGATTGTGGACAGAAATATGTCAATGCCGTGAATGGGCTGACGGATGGGGTTGGTGGTGGCATTAGTACAAGAAAGGAGAGCACAGCAAGTGCCACTTCTACTCATAATTCCGACGTTAGTGGAACCGATCCCATCGATGGCTCGAACCATGGTCAAGGGAATGAGACCATCGGGTCATCACCCAGAAGAAATTCAAGGCTGTCAAACGACACTACTCCGAGATTAAATGCCAATCCCTTCCCTGTGGCTTTACCCGATGCTTCTACAGTTTCATTGGGCATTCCGGTGGTTAATTCTGGTCTTCTCCAAGCTACATCTTCTCAGCCAGAGGTTCAGCTAGATCGGTCTGTGCCGATCTCTGAATTGGGATTGCATCAACCTGGAACTGACCTTCCACCCCCTATATCTTACCCTCATTCTTATCTCAATCCTCACCAAGAGACAGGCATTGATTATGTACAGATTGCCTCCCCTATGGCGTACCCAAATCCTCAAGTTTTAGGGACAGCTGCTCCGGTGTTAACTCAGCCACAGATTCATGATAATATCACCGGACTTGCTCCTTCCCGGTTGTTTCAGCCAATCCACATGACAATGGTGGCTCCCTCGTATGCTCAAATCGGTATGAGCCCAAATGTGGTTCTGCCATCAGTTCAGCCTCAACACATCCAGCTTGATCATTATGTTCAAGACAGTCCATTCATGCCGAGGGCCCTTCAACTTCCGGCCGAGCAAAGCTATGGCTCGTACCAGGTTCCAACCCCGACGACACTACTAGGTGGTGGATTTATTCCGCACCCGGTACCTTCTGCTAATCGAGTAATTTTCTCTGACGGATTGGTACCTCATCAGCAGGTATTGTTTGATCAGAAATTTCCAAGGATGGAGAACTGTTATATGTGTCAGCATGCTTTACCTCATGCACATTCTGATACTTTGGCACAGGATAAAAGAGACAGTGGTGCCAACCTTTTATCTGAAGCTAACTCCAATTTTTGTAGCCTACAAGTGGACGATAATTTAAAAGCTCGGCAAATTGGAACTGGAGCATTAGAAGAAAACATTCTTGAACTGGGAGCTGGGGCTCGAACCCATGTAGATGGTCAAGTTGGTACATCTCCATTGGCGACGGATGCCTGCTCACGATATACTGGGGTGAATAATGAAAATGAAAGAATCCCTCCCAACCCCGAAGGTATCATTGGGAGAGCAAGTGAAGGGCAGTCCCCTTATGTGGCATTTGTTGGCACTCCTCCTCAATCCTTTCAAGATGATGTTCTTCAGCCGAATCGTGAGCTACTGCCTTATCCAGTCAGACAGAACACCAGACCTACCACCAATCACGATGATTGTTCAGTCAGAGGTATCACTACCAAGACTTTTGAGAATGTTATTCAGGGATCCCCAGAAGAATATTCTGATAAACATCCTGGCCCTCTTCTGAGTGAAGATTATCTGGATGTACCCATTTCTTATGACCGTCTGGGAATAATTGATGAGAATGTGAAAATGGAAGATAATTTTCTTTGGAATCCAAAATCAGTTGTAGAGATGGATGTTCGGTTAGATGACGAAATTAGCAGGCGCAAAAAGGCTCCGGATACTAATCATAATAGACCACTAGGAGCTTTGTCATCAGAATTGGTGAACATGGGAAAATTTCAACCAGTCCAGCCTTCTGAGGTTGCAGAATTATCTAGTTTGGATTTCCCGGGACAGCATCCGCAGGCTAATATTGGAATTCATCCGTTGGAGTGTGACAAATTTTTTCATGGACGAAATCCTCAGTTGTTGAGTGTCGGGCTTAACCAACAAAGTCATAACATTCCATCACACTTTCACTCCAAGGTTGCATCCAGTGATGTTGAAGCTGTTGCTTTGAAAGGAGATGAACTCCCCTCCAAATTTCCCCACTGTAGACATGGAAATGTTACGGATTCCTCAAATTCACTGTTTAGCGAGCATGATCCTTGGAATTTTAACCACGACGCACGTTGTCTGCCTCCAAAACCTACAAAAATTCTGTCCAAAAAGGATTTATATGCTAAGGAACCCTTCATAGAAAACCATTTGGGTACTAATAAGGAGCAACTCAATCAAGAATGCATACTCAACGATCCAATTCATCAACCATTGGGTGATTTGAGCAAAGATTTCAATTCAGAGCGCTCAGCAGAAGAACAAATCAAGCAAGATCTTCAAGCTGTTGCAGAGTGTGTTGCTGCTTCTGTTCTTCAGTCAGCTTCATCCTCCAATGCAGACGTCCACGAAAGAATCCAATCCATTTATGATGCCGATGAAGCTGTAGTGGTTCAAAATAGCAATATAGACAAGGAGCCTAAAACGACACTGCTAGACAGAGCAAATGTTGGTTTCCCAGTTTCTGATGGATTTGGTCGTTTACAGATCATAAGGAACAGTGACCTCGAGGAGATGAAAGAACTCGGTTCTGGTACCTATGGCACCGTTTATCATGGGAAATGGAGGGGGACAGATGTTGCCATCAAAAGAATTAACGAGAGGTGCTTTGCTGGGAAACCTTCAGAAAAGGAACGCTTGAGAGAGGATTTCTGGAATGAAGCAATTAAACTTGCTGACTTGCATCATCCAAACGTGGTAGCTTTCTACGGTGTCGTGCTTGATGGGCCCGGTGCATCTGTGGCAACAGTCACGGAGTATATGGTCAATGGATCGCTAAGAAATGCTTTGCAGAAAAATGAGAAGAGTCTTGACAAGCGCAAACGTCTCTTGATTGCAATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAACATAGTGCATTTTGATTTGAAAAGTGATAACTTATTGGTCAATCTTAGAGACCCTCATCGGCCGATATGCAAGGTTGGTGATTTGGGTCTATCCAAGGTAAAATGTCAAACGTTGATATCAGGGGGAGTGCGAGGAACGCTCCCGTGGATGGCTCCAGAACTTTTGAATGGTAGCAGTTGCCTTGTGTCTGAGAAAGTTGATGTATTCTCATTCGGGATCGTAATGTGGGAACTTCTTACTGGAGAGGAACCATATGCCGATATGCACTATGGCGCCATAATTGGCGGTATCGTGAGCAACACATTGCGGCCACCTGTGCCTGAATATTGTGATGCAGAATGGAAATCAATGATGGAGAGGTGCTGGTCTACCGAGCAATTTGAGAGGCCGAGTTTCACGGAGATAGCCAACGAGTTACGATCAATGGCCGCTAAACTTCCTCCGAAAGGACAGAATCAACAACTTCCCTCAACCCATATACTAAGATGA 4242 44.88 MAFDQNLIPTDLQPLNVARTVVEEPRITPPATALRGYKGHIPNEVCDVVSHNSVPVIYPAMVSDVGSTATGYGNVVQGVSPWCPRAPAPASFVQPAMDPSLRLAYSVNPNTFNHLLPNGVDVGSGGLSSSPNLSNQIVGNCNDVLASVGSSSNWCNRVNGSVVDETSGDSIGSLGNVISRESGADRLSDEGGDGSLSGKIKFLCSFGGKILPRPSDRMLRYVGGQTRIISVRRDVSFDELVQKFLDAYGQPVVIKYQLPGEDLDALVSISCPDDLDNMLDEYEKLIEMSSDGSYKLRVFLFSASELDYSGMEPFVDFIDCGQKYVNAVNGLTDGVGGGISTRKESTASATSTHNSDVSGTDPIDGSNHGQGNETIGSSPRRNSRLSNDTTPRLNANPFPVALPDASTVSLGIPVVNSGLLQATSSQPEVQLDRSVPISELGLHQPGTDLPPPISYPHSYLNPHQETGIDYVQIASPMAYPNPQVLGTAAPVLTQPQIHDNITGLAPSRLFQPIHMTMVAPSYAQIGMSPNVVLPSVQPQHIQLDHYVQDSPFMPRALQLPAEQSYGSYQVPTPTTLLGGGFIPHPVPSANRVIFSDGLVPHQQVLFDQKFPRMENCYMCQHALPHAHSDTLAQDKRDSGANLLSEANSNFCSLQVDDNLKARQIGTGALEENILELGAGARTHVDGQVGTSPLATDACSRYTGVNNENERIPPNPEGIIGRASEGQSPYVAFVGTPPQSFQDDVLQPNRELLPYPVRQNTRPTTNHDDCSVRGITTKTFENVIQGSPEEYSDKHPGPLLSEDYLDVPISYDRLGIIDENVKMEDNFLWNPKSVVEMDVRLDDEISRRKKAPDTNHNRPLGALSSELVNMGKFQPVQPSEVAELSSLDFPGQHPQANIGIHPLECDKFFHGRNPQLLSVGLNQQSHNIPSHFHSKVASSDVEAVALKGDELPSKFPHCRHGNVTDSSNSLFSEHDPWNFNHDARCLPPKPTKILSKKDLYAKEPFIENHLGTNKEQLNQECILNDPIHQPLGDLSKDFNSERSAEEQIKQDLQAVAECVAASVLQSASSSNADVHERIQSIYDADEAVVVQNSNIDKEPKTTLLDRANVGFPVSDGFGRLQIIRNSDLEEMKELGSGTYGTVYHGKWRGTDVAIKRINERCFAGKPSEKERLREDFWNEAIKLADLHHPNVVAFYGVVLDGPGASVATVTEYMVNGSLRNALQKNEKSLDKRKRLLIAMDAAFGMEYLHSKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSCLVSEKVDVFSFGIVMWELLTGEEPYADMHYGAIIGGIVSNTLRPPVPEYCDAEWKSMMERCWSTEQFERPSFTEIANELRSMAAKLPPKGQNQQLPSTHILR 1413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43603977 43608996 - Bda015038.1 Bda02g00334 2629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00334 1413 SUPERFAMILY Protein kinase-like (PK-like) 1119 1389 IPR011009 -
Bda02g00334 1413 MobiDBLite consensus disorder prediction 340 394 - -
Bda02g00334 1413 Pfam PB1 domain 219 301 IPR000270 GO:0005515
Bda02g00334 1413 SMART serkin_6 1127 1393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00334 1413 ProSiteProfiles Protein kinase domain profile. 1127 1394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00334 1413 CDD PB1_UP2 203 301 - -
Bda02g00334 1413 Gene3D - 220 303 - -
Bda02g00334 1413 PRINTS Tyrosine kinase catalytic domain signature 1361 1383 IPR001245 GO:0004672|GO:0006468
Bda02g00334 1413 PRINTS Tyrosine kinase catalytic domain signature 1246 1264 IPR001245 GO:0004672|GO:0006468
Bda02g00334 1413 PRINTS Tyrosine kinase catalytic domain signature 1209 1222 IPR001245 GO:0004672|GO:0006468
Bda02g00334 1413 PRINTS Tyrosine kinase catalytic domain signature 1317 1339 IPR001245 GO:0004672|GO:0006468
Bda02g00334 1413 ProSitePatterns Protein kinases ATP-binding region signature. 1133 1164 IPR017441 GO:0005524
Bda02g00334 1413 Pfam Protein tyrosine and serine/threonine kinase 1128 1390 IPR001245 GO:0004672|GO:0006468
Bda02g00334 1413 Gene3D Phosphorylase Kinase; domain 1 1120 1214 - -
Bda02g00334 1413 Gene3D Transferase(Phosphotransferase) domain 1 1215 1410 - -
Bda02g00334 1413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1252 1264 IPR008271 GO:0004672|GO:0006468
Bda02g00334 1413 PANTHER SERINE-THREONINE PROTEIN KINASE 163 1397 - -
Bda02g00334 1413 CDD STKc_MAP3K-like 1133 1390 - -
Bda02g00334 1413 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 163 1397 - -
Bda02g00334 1413 SUPERFAMILY CAD & PB1 domains 215 310 - -
Bda02g00334 1413 SMART PB1_new 214 303 IPR000270 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01930 Bda-Chr1:55558419 Bda02g00334 Bda-Chr2:43603977 3.66E-31 dispersed
Bda02g00334 Bda-Chr2:43603977 Bda06g00238 Bda-Chr6:4222295 1.74E-37 dispersed
Bda11g00996 Bda-Chr11:9741100 Bda02g00334 Bda-Chr2:43603977 6.62E-34 dispersed
Bda02g00332 Bda-Chr2:43576041 Bda02g00334 Bda-Chr2:43603977 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69492 PF07714 PK_Tyr_Ser-Thr 6.70E-60 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00334 - - qlo:115977166 1419.83