Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda02g00336 | ATGGAGGATACTCACATCTGCATTGGCAATTTGGCTAAGAAATTTGGTTATAATGTCACTGACGAAACTGTCTCTTTCTATGGTGTATTTGATGGTCATGGAGGAAGCGGTGCTGCTAAATTCGTGCGTGATCACTTACCGAGAGTAATTGTCGAAGATGCAGACTTTCCTTTGGAGCTCGAGAAGGTGATCACAAGGTCGTTTATGGAGACGGATGCTGCCTTTGCAAAAACATGCTCTGTCGAATCTTCCTTGAATATCATTTCTCGCAGGTCATTGTTGGTGGCAAATGCCGGAGATTGTCGGGCAGTGCTTTCCCGTCGTGGAGGTGCAGTAGAAATGTCTAGAGACCACAGACCCTGTTGTTCCAAAGAGAGGATAAGAATTGAGGCCTTGGGAGGATACATCGATGACGATTATCTAAACGGACAATTAGGCGTAACTCGGGCATTGGGTGATTGGCATCTAGAAGGGATGAAGGAATCAAGCGAAAAGGGCGGCCCACTTAGTGCAGAACCTGAACTTAAACTCACGACATTGACTACGGATGACGAATTCTTGATCATAGGCAGCGATGGAATATGGGACGTTTTCACAAGCCAAAACGCAGTTGATTTTGCTCGGAGGAGACTTCAAGAGCACAACGACGTGAAGTTGTGCTGCAAAGAAGTTATCGAGGAAGCTGTAAAACGACGGGCAGTGGATAATCTGACGGTTGTCATAGTGAGCTTTCACTCGGAGCCCCCTCAATCTTTAGCTGTCCAGAGGGGGAGAGTGAGGAGAAGCATATCGGCGGAGGGGCTGCAGAACCTTAAGTTTCTGTTGGAAGGTTAG | 834 | 47.12 | MEDTHICIGNLAKKFGYNVTDETVSFYGVFDGHGGSGAAKFVRDHLPRVIVEDADFPLELEKVITRSFMETDAAFAKTCSVESSLNIISRRSLLVANAGDCRAVLSRRGGAVEMSRDHRPCCSKERIRIEALGGYIDDDYLNGQLGVTRALGDWHLEGMKESSEKGGPLSAEPELKLTTLTTDDEFLIIGSDGIWDVFTSQNAVDFARRRLQEHNDVKLCCKEVIEEAVKRRAVDNLTVVIVSFHSEPPQSLAVQRGRVRRSISAEGLQNLKFLLEG | 277 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 43621997 | 43623483 | - | Bda015039.1 | Bda02g00336 | 2631 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda02g00336 | 277 | Gene3D | - | 1 | 267 | IPR036457 | - | |
| Bda02g00336 | 277 | SMART | PP2C_4 | 2 | 242 | IPR001932 | - | |
| Bda02g00336 | 277 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 244 | IPR001932 | - | |
| Bda02g00336 | 277 | SUPERFAMILY | PP2C-like | 1 | 246 | IPR036457 | - | |
| Bda02g00336 | 277 | CDD | PP2Cc | 1 | 244 | IPR001932 | - | |
| Bda02g00336 | 277 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 265 | IPR015655 | GO:0004722|GO:0006470 | |
| Bda02g00336 | 277 | Pfam | Protein phosphatase 2C | 1 | 236 | IPR001932 | - | |
| Bda02g00336 | 277 | ProSitePatterns | PPM-type phosphatase domain signature. | 26 | 34 | IPR000222 | GO:0043169 | |
| Bda02g00336 | 277 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 265 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g01974 | Bda02g00336 | CCT | |
| Bda01g01974 | Bda02g00336 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda02g00336 | Bda-Chr2:43621997 | Bda13g01275 | Bda-Chr13:35110645 | 5.38E-114 | dispersed | |
| Bda01g01974 | Bda-Chr1:56115802 | Bda02g00336 | Bda-Chr2:43621997 | 2.63E-151 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda02g00336 | K14803 | - | fve:101296420 | 441.039 |