Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00350 ATGGGGGTTGGTAAGATATCATGGCGATCAGTTCTTCCATGCAGCAAGCCGGAGTGCGGGTCCAAGACCTGCACCAAAGTTATGGCGAAACAGAGCTCGTTTCAAAGGATTTCGCATCTGGAATTGAGCAATCCGGGGTCGATGCTGTCGGAGGATCTTTCGATGTCTCTTGTGGGATCTGATATTCATGTCTTCACTCTGGCTGAGTTGAAGGTGATAACCCAGAATTTCTCGGCTTCTAATTTCATCGGGGAAGGTGGGTTTGGACCTGTACACAAGGGTTTCATCGATGACAAGCTTAGACCAGGACTGAAGGCTCAGCCGGTGGCGGTGAAGCTTTTGGATTTGGATGGCACGCAGGGACATAGGGAGTGGCTGACTGAGGTGATTTTTCTGGGTCAGCTGAGGCATCCACACCTGGTAAAGCTTATAGGGTATTGCTGTGAAGATGAACACAGGCTACTCGTTTATGAATACATGCCGAGAGGCAGCTTAGAGAATCAACTCTTTAGAAGGTATTCGGCGTCGCTGCCGTGGTCGTCGAGAATGAAAATCGCTCTCGGCGCTGCTAAGGGTCTCGCTTTCCTCCACGAGGCGGAGAAACCAGTCATATATAGGGACTTCAAGGCTTCGAATATACTGCTAGACTCCGATTTCAGTTCAAAACTCTCAGACTTTGGTTTGGCGAAAGATGGGCCAGAAGGCGACGACACCCACGTCTCAACAAGAGTGATGGGGACGCATGGCTACGCTGCTCCCGAATATATCATGACTGGGCACTTGACGGCAATGAGTGACGTATACAGCTTCGGCGTGGTGCTGCTAGAGCTTCTAACAGGGCGGAGATCGGTGGACAAGAGCCGGCCTCATAGGGAGCACAACTTGGTGGACTGGGCAAGGCCAATGCTCAATGACCCTCGAAAGCTTGCCCGAGTAATGGACCCGAGGCTGGAAGGGCAGTACTCGGAAGTGGGCGCTCGGAAGGCGGCGGAATTGGCTTATCAATGCCTGAGCCACCGCCCCAAGCACCGGCCCACCACGAGCGCCATCGTTAAGACTTTAGAGCCGCTCAAAGACTTCGATGACATCCTCGCCGGACCCTTCGTCTACACCGTTGCACCAGAGAGACATGATTTGGGGAAGGAAGATGTCAAACAAAGCCCAGCACAGAGAGATGTAAACAAGGAAAACGGGCAGCGCCGCCCCCATGATCATCAACGGAGATATCCAAAATCACCCAACGCCTACTCGGAGACAGCTCTCGGTCAAAATAACAGAAAGTAA 1284 52.34 MGVGKISWRSVLPCSKPECGSKTCTKVMAKQSSFQRISHLELSNPGSMLSEDLSMSLVGSDIHVFTLAELKVITQNFSASNFIGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGTQGHREWLTEVIFLGQLRHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSASLPWSSRMKIALGAAKGLAFLHEAEKPVIYRDFKASNILLDSDFSSKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSRPHREHNLVDWARPMLNDPRKLARVMDPRLEGQYSEVGARKAAELAYQCLSHRPKHRPTTSAIVKTLEPLKDFDDILAGPFVYTVAPERHDLGKEDVKQSPAQRDVNKENGQRRPHDHQRRYPKSPNAYSETALGQNNRK 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43848957 43850567 - Bda015061.1 Bda02g00350 2645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00350 427 PANTHER OS01G0588500 PROTEIN-RELATED 23 399 - -
Bda02g00350 427 MobiDBLite consensus disorder prediction 412 427 - -
Bda02g00350 427 Gene3D Phosphorylase Kinase; domain 1 44 159 - -
Bda02g00350 427 MobiDBLite consensus disorder prediction 379 427 - -
Bda02g00350 427 CDD STKc_IRAK 83 357 - -
Bda02g00350 427 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 23 399 - -
Bda02g00350 427 ProSiteProfiles Protein kinase domain profile. 77 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00350 427 MobiDBLite consensus disorder prediction 379 411 - -
Bda02g00350 427 Gene3D Transferase(Phosphotransferase) domain 1 160 364 - -
Bda02g00350 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bda02g00350 427 Pfam Protein tyrosine and serine/threonine kinase 81 354 IPR001245 GO:0004672|GO:0006468
Bda02g00350 427 SUPERFAMILY Protein kinase-like (PK-like) 54 355 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00350 Bda11g01016 CCT
Bda02g00350 Bda11g01016 ECH
Bda02g00350 Bda09g01062 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00350 Bda-Chr2:43848957 Bda02g00366 Bda-Chr2:44070798 0 dispersed
Bda06g00169 Bda-Chr6:2389752 Bda02g00350 Bda-Chr2:43848957 4.19E-19 dispersed
Bda10g00874 Bda-Chr10:43235263 Bda02g00350 Bda-Chr2:43848957 5.46E-46 dispersed
Bda07g01690 Bda-Chr7:31312645 Bda02g00350 Bda-Chr2:43848957 1.07E-34 transposed
Bda02g00350 Bda-Chr2:43848957 Bda09g01062 Bda-Chr9:40837728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69493 PF07714 PK_Tyr_Ser-Thr 4.30E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00350 - - jre:109008510 667.151