Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00370 ATAATGAGTTGTAGTAGATTTCCATTTACACCAGGTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATTTTCAAGTACATGGTTTCAGGCATCCCCATCCCTCCTGATCTTCTCTTTAGTGTCAAAAGAAACTGCTTGGATTCTCATCTCTTCCCTCGCCAACCTCAGCAAGTGGGGTGGAACTATTTAAACATGGGTCTGGGGAGAAAAATCGACCCAGAACCAGGGAGGTGCAGGAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTAATTTCAAAAGCACAACAACCAACCCAGAAGCAAACCTTTCACCATCACCAGTCCTGTCTTCCCTGCCCAAGAACCAATTTTCTCTCTCTACAAACCCTCATTCTCTCTCGTCGGATGCCAGCCGCCATTACCCCCAGCTTCACCATTCTTCTTTCCATAACAATACCCATATTCACCCCCCCTCTCTTTATCGTCAAACCTCTTCAAGGCCACCTGGTTTTGTTTTGGACGTGGAGACCCCCTCTTTCTTGGACTCGTGCTCTTACTCCCAGCTTGCAACAGATTACAGAAGAAATAGGTGTGCTTATCGGATGAAAGAGGAACTGGGTGAGTATGCTTTCTTCTCAGAATCTTCTGGAACAATGAGAAGCTTCTCAGCTTCTCCCATGGAGGATTCATGGCAGTTGACGCCTCTAACAATGAGTTGCTCTTCATCCTCATCCAAACAGAGGGCCTCGAGTTTGCAGAGTGATGACTATTCATACTTGCAGCTCCAAAGCGTCACTGAGACCACCGTCCCCCAAGGCCAACCGGAAAAAGCTCCTCCAATGGCAATGAAGATGGAGGGAGAAGAACCACAGAAGATCTTCCACCGTTTCTTCGACGAATGGCCACCGAAAGACAGAAACTCATGGCTTGAGGTCGATGATAAACCCTCAAATAACGGGTCAATCTCGACTACTAAGCTCTCCATTTCCATCCCAAACTCTACCCTAGATTTCTCCGTCTTCAATTCCAGAATCCAGAGTGGAAATGAAAACTCAAGTATCAAACCAGCTCATTTTTCAAATTCAGATCCCTAA 1152 46.27 IMSCSRFPFTPGQWQELEHQALIFKYMVSGIPIPPDLLFSVKRNCLDSHLFPRQPQQVGWNYLNMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVNFKSTTTNPEANLSPSPVLSSLPKNQFSLSTNPHSLSSDASRHYPQLHHSSFHNNTHIHPPSLYRQTSSRPPGFVLDVETPSFLDSCSYSQLATDYRRNRCAYRMKEELGEYAFFSESSGTMRSFSASPMEDSWQLTPLTMSCSSSSSKQRASSLQSDDYSYLQLQSVTETTVPQGQPEKAPPMAMKMEGEEPQKIFHRFFDEWPPKDRNSWLEVDDKPSNNGSISTTKLSISIPNSTLDFSVFNSRIQSGNENSSIKPAHFSNSDP 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44103075 44104448 + Bda005772.1 Bda02g00370 2665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00370 383 PANTHER GROWTH-REGULATING FACTOR 6 4 354 - -
Bda02g00370 383 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda02g00370 383 ProSiteProfiles WRC domain profile. 72 116 IPR014977 -
Bda02g00370 383 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda02g00370 383 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda02g00370 383 MobiDBLite consensus disorder prediction 121 186 - -
Bda02g00370 383 Pfam WRC 73 115 IPR014977 -
Bda02g00370 383 PANTHER - 4 354 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bda02g00370 383 MobiDBLite consensus disorder prediction 121 185 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00370 Bda11g01020 CCT
Bda02g00370 Bda11g01020 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00370 Bda-Chr2:44103075 Bda14g01295 Bda-Chr14:14100569 5.56E-38 dispersed
Bda05g00898 Bda-Chr5:57396978 Bda02g00370 Bda-Chr2:44103075 1.75E-47 transposed
Bda06g00871 Bda-Chr6:11949740 Bda02g00370 Bda-Chr2:44103075 7.74E-64 transposed
Bda11g01020 Bda-Chr11:9965409 Bda02g00370 Bda-Chr2:44103075 5.67E-97 transposed
Bda02g00370 Bda-Chr2:44103075 Bda04g00930 Bda-Chr4:59084763 4.66E-54 wgd
Bda02g00370 Bda-Chr2:44103075 Bda09g01069 Bda-Chr9:41068971 1.00E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15542 PF08879 WRC 8.10E-21 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00370 - - tcc:18588300 414.846