Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00383 ATGAAAAAGGGTGGCTTAATCCCCAAGCTCAATATCTCTCTTCCTCCTTCTGATGAGATTTCATTCGCTAAATTCTTGACGCAAAGCGGTACGTTTAAGGACGGTGATCTGCTTGTCAATAGGGATGGAGTTCGGATTGTAACTGAGAGCGAAGCTGAAGCTCCTCCTCCAATTAAACCTTCAGACAACAACCAGTTGAGTTTGGCAGATATAGACACAATCAAAGTCATTGGAAAAGGAAATGGTGGAATTGTGCAATTGGTGAGACACAAATGGACAGGCCAGTTTTTTGCATTAAAGGTAATTCAAATGAGCATTGACGAATCTTATCGCAAGCTGCTAGCACAGGAACTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTGTATGCTATCAGTCTTTCTATGACAATGGTGCCATATCTATCATATTAGAGTACATGGATGGAGGATCTTTGGCTGATTTTTTGAAAAAGGTGCTGAAAGGGTTGTCTTACCTGCATCATGAAAAGCACGTTATTCATAGGGACTTGAAACCTTCTAATTTGTTAATAAATCACAGAGGGGAAGTTAAAATCACTGACTTTGGTGTAAGTACCATGATGGCAACCACCTCTGGACTGGCAAATACTTTTGTGGGCACATATAACTATATGTCTCCAGAGCGAATTACTGGAGGCAGACATGACAATAAAAGTGACATCTGGAGCTTGGGATTAGTACTGCTTGAGTGTGCGATAGGTCAATTCCCTTATTTGCCACCAGAGGGAGACGAAGGTTGGGTTAACTTTTATGAGCTGATGGAAGCCATTGTTGATCACCCACCACCTTCTGCTCCGCGGGACCAATTTTCTCCAGATTTCTGCTCATTTATTTCTGCGTGTGTACAAAAAGATCCAAAGGATAGACTTTCAGCACGAGAACTTCTGATGCACCCTTTCATCAGCACGCAGAAAGGCTTAGACGTCGATCTTTCATCTTACTTCACTGATGCAGGATCTCCCCTTGCTACTTTCTAA 1023 41.94 MKKGGLIPKLNISLPPSDEISFAKFLTQSGTFKDGDLLVNRDGVRIVTESEAEAPPPIKPSDNNQLSLADIDTIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMSIDESYRKLLAQELKINQSAQCPYVVVCYQSFYDNGAISIILEYMDGGSLADFLKKVLKGLSYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSTMMATTSGLANTFVGTYNYMSPERITGGRHDNKSDIWSLGLVLLECAIGQFPYLPPEGDEGWVNFYELMEAIVDHPPPSAPRDQFSPDFCSFISACVQKDPKDRLSARELLMHPFISTQKGLDVDLSSYFTDAGSPLATF 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44203814 44206536 + Bda005784.1 Bda02g00383 2678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00383 340 Gene3D Transferase(Phosphotransferase) domain 1 150 335 - -
Bda02g00383 340 ProSiteProfiles Protein kinase domain profile. 71 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00383 340 Pfam Protein kinase domain 73 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00383 340 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 339 - -
Bda02g00383 340 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bda02g00383 340 SMART serkin_6 71 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00383 340 SUPERFAMILY Protein kinase-like (PK-like) 72 319 IPR011009 -
Bda02g00383 340 CDD PKc_MAPKK_plant_like 69 316 - -
Bda02g00383 340 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Bda02g00383 340 PANTHER MAP KINASE KINASE 1 339 - -
Bda02g00383 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00383 Bda11g01036 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00383 Bda-Chr2:44203814 Bda07g01729 Bda-Chr7:32401743 1.37E-68 dispersed
Bda11g01036 Bda-Chr11:10100335 Bda02g00383 Bda-Chr2:44203814 8.61E-168 transposed
Bda11g01809 Bda-Chr11:53177394 Bda02g00383 Bda-Chr2:44203814 3.08E-69 transposed
Bda01g02038 Bda-Chr1:56647120 Bda02g00383 Bda-Chr2:44203814 3.46E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69495 PF00069 Pkinase 1.60E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00383 K20603 - zju:107424118 557.37