Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00390 | ATGGAAAATATTTCTACTGTTAGAGGTGATATCTCAGAAGAAGGGACGAGGAAATCAGTTCCGTTTTCTAGGAAAGCACCTCTCGGTCCACCTCCGTTGTGTTCTATTTGTCAGCACAAGGCTCCGGTATTTGGAAATCCTCCCAGATGGTTCACTTTCTCTGAGTTAGAGCTAGCCACTGGTGGATTTTCAAGGGCGAATTTCTTGGCTGAAGGTGGATTTGGCTCTGTCCATCGAGGCGTCTTACCAGATGGCCAAGTAGTTGCTGTCAAGCAATATAAACTGGCTAGTTCCCAAGGTGATCGAGAGTTTTGCTCCGAAGTTGAGGTCTTAAGCTGTGCTCAGCATCGAAATGTTGTTTTGCTGATTGGCTTCTGTGTAGAGGATGGAAGAAGGTTGCTTGTGTATGAGTACATTTGCAATGGCTCTTTGGATTCTCATCTTTATGGGCGAAATGGTGATCCATTGGAATGGTCAGCTAGGCAGAAGATTGCCGTGGGAGCAGCTCGAGGATTGAGATACCTTCACGAAGAGTGTCGAGTGGGCTGCATTGTGCACCGTGATTTACGGCCTAACAATATTCTTCTTACCCACGATTTCGAACCATTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAACCAAATGGAGACTTGGGCGTGGAAACTAGAATACTTGGAACATTTGGGTACTTGGCTCCAGAATATGCTCAGAGCGGCCAAATAACAGAAAAAGCCGATGTGTATTCCTTTGGAGTAGTTTTACTGGAACTAATAGCCGGTCGGAAAGCGATCGATCTAAATCGTCCTAAAGGCCAGCAATCCCTGACCGAGTGGGCTCGGGCTTTGCTTAAAAGAGACGTCGTCGATGAACTAGTCGATCCACGCCTAAGGCACTGTTATCTGAACGAGGAAGTTCGTCAGATGCTGCAATGTGCGTCCTTGTGCATCCGGCACGATCCTTATTCCCGACCTCGCATGTCACAGGTGCTTCGGATGCTGGAAGGCGACGTCTTCGTGTAA | 1020 | 47.75 | MENISTVRGDISEEGTRKSVPFSRKAPLGPPPLCSICQHKAPVFGNPPRWFTFSELELATGGFSRANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDREFCSEVEVLSCAQHRNVVLLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNGDPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEPLVGDFGLARWQPNGDLGVETRILGTFGYLAPEYAQSGQITEKADVYSFGVVLLELIAGRKAIDLNRPKGQQSLTEWARALLKRDVVDELVDPRLRHCYLNEEVRQMLQCASLCIRHDPYSRPRMSQVLRMLEGDVFV | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 44427014 | 44428471 | - | Bda005796.1 | Bda02g00390 | 2685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00390 | 339 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 184 | 196 | IPR008266 | GO:0004672|GO:0006468 | |
Bda02g00390 | 339 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 337 | - | - | |
Bda02g00390 | 339 | Gene3D | Phosphorylase Kinase; domain 1 | 35 | 138 | - | - | |
Bda02g00390 | 339 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 333 | IPR001245 | GO:0004672|GO:0006468 | |
Bda02g00390 | 339 | ProSiteProfiles | Protein kinase domain profile. | 63 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00390 | 339 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 333 | IPR011009 | - | |
Bda02g00390 | 339 | SMART | tyrkin_6 | 63 | 333 | IPR020635 | GO:0004713|GO:0006468 | |
Bda02g00390 | 339 | PANTHER | OS01G0253100 PROTEIN | 22 | 338 | IPR045271 | GO:0004714|GO:0006468 | |
Bda02g00390 | 339 | PIRSF | ILK | 34 | 336 | - | - | |
Bda02g00390 | 339 | PANTHER | OS01G0602800 PROTEIN | 22 | 338 | - | - | |
Bda02g00390 | 339 | CDD | STKc_IRAK | 69 | 335 | - | - | |
Bda02g00390 | 339 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00390 | Bda-Chr2:44427014 | Bda12g01075 | Bda-Chr12:42471649 | 0 | dispersed | |
Bda02g00390 | Bda-Chr2:44427014 | Bda11g01113 | Bda-Chr11:11007129 | 2.74E-106 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69496 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-42 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00390 | - | - | cit:102622957 | 585.489 |