Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00405 | ATGTCGTGGCAGGCGTACGTAGATGAACATTTGATGTGCGAAATCGATGGCCAGGGCCAGCATCTTGCCGCCGCGGCAATCCTCGGCCATGACGGTAGTGTTTGGGCTCAAAGCTCTTCCTTCCCTCAGTTGAATCCCAAGGAGATAGCTGACATCCTCAAAGATTTTGAAGAACCAGGTCACCTTGCTCCTACAGGTTTACACCTTGGGGCTGCAAAATACATGGTAATCCAAGGAGAGGCAGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACCATTAAGAAGACTGGACAAGCCCTAATTTTTGGCATCTATGAAGAGCCTGTCACTCCAGGACAGTGCAACATGGTTGTTGAGAGGTTGGGGGATTACTTGATTGACCAAGGCCTTTAA | 402 | 50.0 | MSWQAYVDEHLMCEIDGQGQHLAAAAILGHDGSVWAQSSSFPQLNPKEIADILKDFEEPGHLAPTGLHLGAAKYMVIQGEAGAVIRGKKGSGGITIKKTGQALIFGIYEEPVTPGQCNMVVERLGDYLIDQGL | 133 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 44628453 | 44630263 | + | Bda005811.1 | Bda02g00405 | 2700 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00405 | 133 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Bda02g00405 | 133 | PANTHER | PROFILIN | 1 | 133 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
Bda02g00405 | 133 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PANTHER | PROFILIN | 1 | 133 | - | - | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 | |
Bda02g00405 | 133 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02037 | Bda-Chr1:56644095 | Bda02g00405 | Bda-Chr2:44628453 | 1.11E-74 | dispersed | |
Bda11g01079 | Bda-Chr11:10534880 | Bda02g00405 | Bda-Chr2:44628453 | 1.32E-71 | wgd | |
Bda02g00405 | Bda-Chr2:44628453 | Bda09g01121 | Bda-Chr9:41825566 | 1.43E-91 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00405 | K05759 | - | jre:109010102 | 248.825 |