Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00405 ATGTCGTGGCAGGCGTACGTAGATGAACATTTGATGTGCGAAATCGATGGCCAGGGCCAGCATCTTGCCGCCGCGGCAATCCTCGGCCATGACGGTAGTGTTTGGGCTCAAAGCTCTTCCTTCCCTCAGTTGAATCCCAAGGAGATAGCTGACATCCTCAAAGATTTTGAAGAACCAGGTCACCTTGCTCCTACAGGTTTACACCTTGGGGCTGCAAAATACATGGTAATCCAAGGAGAGGCAGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACCATTAAGAAGACTGGACAAGCCCTAATTTTTGGCATCTATGAAGAGCCTGTCACTCCAGGACAGTGCAACATGGTTGTTGAGAGGTTGGGGGATTACTTGATTGACCAAGGCCTTTAA 402 50.0 MSWQAYVDEHLMCEIDGQGQHLAAAAILGHDGSVWAQSSSFPQLNPKEIADILKDFEEPGHLAPTGLHLGAAKYMVIQGEAGAVIRGKKGSGGITIKKTGQALIFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44628453 44630263 + Bda005811.1 Bda02g00405 2700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00405 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Bda02g00405 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bda02g00405 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Bda02g00405 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Bda02g00405 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Bda02g00405 133 PANTHER PROFILIN 1 133 - -
Bda02g00405 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Bda02g00405 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Bda02g00405 133 SMART prof_2 1 133 IPR005455 GO:0003779
Bda02g00405 133 CDD PROF 2 132 IPR005455 GO:0003779
Bda02g00405 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02037 Bda-Chr1:56644095 Bda02g00405 Bda-Chr2:44628453 1.11E-74 dispersed
Bda11g01079 Bda-Chr11:10534880 Bda02g00405 Bda-Chr2:44628453 1.32E-71 wgd
Bda02g00405 Bda-Chr2:44628453 Bda09g01121 Bda-Chr9:41825566 1.43E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00405 K05759 - jre:109010102 248.825