Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00421 ATGGGTTGCATCTATTCAAGGGTTTGTATTGGTGAGATTTCTACGCCAAAAACTTCTAGACTTGCAGAGACTCAAAATGCAGGAATTGCTGCTGGAGTTGGAGTCTTCTCTCCTGCCTCTTCCAACGGCCAAGATGGAGAAGTGGTGGATCAGTTGAATCGGTTTAACACCAACAGAGATTCGGAGGCCGGTATTAGAAGACTCTCAAGGGTTTCATCGCAGTTTTTACCACCGGAAGGATCAAGAACTGTAAAAGTTCCACTTGGCAACTACGAACTACGCTATTCGTTTCTGTCGCAGAGAGGCTATTATCCGGATGCTCTTGATAAGGCCAACCAAGACAGCTTTTGTATCCACACTCCATTTGGAACTAGCCCAGACGACCATTTCTTCGGGGTTTTCGATGGTCATGGAGAATTTGGAGCTCAATGCTCTCAGTACGTTAAGAGAAAAGTATGTGAAAATTTGCTCAGAAACACTAAATTCCAAAAAGACGCTGTTGAGGCTTGCCATGCGGCTTTTCTGGCAACAAATTCACAGCTTCACGCCGATATTTTAGACGACAGCATGAGTGGGACTACTGCTGTGACAATTCTGGTTCGAGGTAGAACCATCTATGTATCTAATTCAGGTGATTCGAGGGCGGTTCTTGCAGAGAAAAGAGGGAAGGATCTTGTAGCTGTCGACCTTTCAATCGATCACACTCCATTTAGGACAGATGAGCTAGAACGAGTTAAGCTTTGCGGGGCCAGAGTTCTCACATTGGATCAAATCGAGGGTCTAAAAGATCCAGATGTGCAATGTTGGGGAGCGGAAGAAGGCGATGAAGGTGATCCTCCGAGGCTCTGGGTCCCAAATGGGATGTTTCCTGGGACGGCTTTTACGAGAAGTATAGGTGATTCACTTGCTGAGACAATTGGGGTTGTTGCTACTCCTGAAATTGTTGTTTTTGAGCTTACATCAAATAATCCTTTCTTCGTACTGGCTAGTGATGGGGTGTTCGAGTTTCTTTCGAGTCAAACAGTTATCGACATGGTTGCAAAGTACAAAGATCCTCGTGATGCTTGTGCTGCGATCGTAGCCGAGTCTTATAGACTTTGGCTACAGTACGAAACTCGGACAGATGATATTACAGTGATCGTTGTGCATATCAATGGCCTAACTAATTTTGTTGGTGAATCAGAAAAAATTGGTGGTTTGATACGCTCACCAATCCCTCAAGTAGTTGAGGTTACAGGTTCAGAATCTCCCTCAATGTATGGTTGGAATTCGAGGATCCATCGTGTGAGGCAAGATTTGTCAAAGGCTCGCCTTCGTGCTATTGAAACTTCTCTAGAGAATGGTCAGATATGGGTTCCTCCATCTCCGGCCCATAGGAAGACATGGGAAGAAGAAGCGCAAATTGAGCGGTCACTGCATGACCATTTCCTTTTCCGAAAATTAACCAATTCTCAGCGGCACGTTTTACTAGATTGCATGCAAAGAGTAGAGATCCATCCTGGAGAAATTGTAGTTAAACAGGGTAGTGAAGGTGATTGTTTTTACGTTGTTGGAAGTGGAGAATTTGAGGTCTTGGCAACCCAGCGAGAGAATGATGGAGAGGTTCCTCGAGTTCTGCAGCACTACACAGCTGAGAAGTTATCGTCTTTTGGAGAACTAGCACTAATGTCTAACAAACCACTCCAAGCCTCTGTTCGAGCTGTAACAAGTGGAACATTATGGGCTTTGAAAAGAGAAGATTTTCGTGGAATTCTCATGTCAGAGTTTACTAATTTGTCATCGTTGAAGCTCCTTCGATCAGTTGATCTTTTATCAAGGTTGACAATCTTGCAGCTGAGTAACATTTCTGATAGTCTTTCTGAAGTTGCCTTTTCAAATGGGCAGGTGATAGTTGATAAGAGCAAAGACCTACATGCATTGCACATCATCCAAAAGGGAGAAGTTAGGATTACTTTTGATGCTGACTTAGTGACCAGTCTGAACATTCACAGCCTAAAATCCGGCAATTATGAAGAAGATGAAAACCCACAAAGCAGCAGAGAAATCTCGTTGGTCAAGGAAGAAGGAAGTTATTTTGGTGAATGGGCTCTTCTCGGTGAGCGTATTGAATCCTTTAGTGCTGTCGCTGTAGGTAATGTTGTGTGTGCTGTCTTAACAAAGGAACAATTCGAGTCTGTCGTTGGCCCTTTACCAAAGCTTCCTCCAGATGATCAGAAGATAACAGAATATTCTTCAAACGTTCTCAAGGAACCTACAAAAAGTATTGATATTTCAGCTCTCAATGATGTTGAGCTCTCTGATCTGGAGTGGAGAACGTGCTTATACGCCAACGATTGCAGTGAGATTGGTATCGTATTGTTAAGAAATCCAGAGCTTCTGCTCAGTCTGAAGAGATTTTCAAAGCATAAAGTAAAAAAGCTTGGGAAGGAAGAACAAGTGTTAAAGGAGAAGAATCTTTTGATGAGTTTGAGCCAATCAACTTGCGTTCCGCAGATCCTTTGCACTCGTGTAGATCAAACACATGCTGGGATATTGCTGAATACATGCCTTGCTTGTCCTTTGTCTTCTATACTTCACACCCGGTTAGATGAGTCTTCTGCTCGATTTTTTGCTGCTTCTCTTGTCATTGCCTTAGATGATTTGCACCAGCATGGTGTACTCTACAGAGGAATATCTCCTGATGTTATAATGCTTGACCAAACAGGACATATACAGCTAGTGGACTTCAGATTTGGAAAGAAGATATGTGGTGAGAGGACATTCACTGCTTGTGGAATGACAGACTTCTTAGCTCCAGAGATAGTCCAAGGAAAAGGCCATGGTTTTGCTGCTGACTGGTGGGCACTCGGAGTCTTGATCTATTACATGCTAAAAGGCGAAAAGCCATTTGGATCATGGAGAGAGAGCGAACTCGATACATTTTCCAAAATCGCGAAAGGAAAATTAAAGCTTCCTCAGATTTTCGACCCCCAAGTCATTGATCTCATATCCAAGTTGCTTGAAGTTGACGAAAGCTCGAGGCTTGGAACTGAAGGTTCAAATTCAGTCAAAAGTCATCCATGGTTTGACGGTGTAGATTGGGACGGGATTAAAGAATGTAGCTTTCCTGTTCCTGATTTTATCCTCTCCCGTCTAACTCAACACCTCGACAATCCCATTCCCTTACTTAACCAACCTCACGACCCAGTTCCTGATTGGATCGAAGGGTGGTAG 3213 43.51 MGCIYSRVCIGEISTPKTSRLAETQNAGIAAGVGVFSPASSNGQDGEVVDQLNRFNTNRDSEAGIRRLSRVSSQFLPPEGSRTVKVPLGNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQYVKRKVCENLLRNTKFQKDAVEACHAAFLATNSQLHADILDDSMSGTTAVTILVRGRTIYVSNSGDSRAVLAEKRGKDLVAVDLSIDHTPFRTDELERVKLCGARVLTLDQIEGLKDPDVQCWGAEEGDEGDPPRLWVPNGMFPGTAFTRSIGDSLAETIGVVATPEIVVFELTSNNPFFVLASDGVFEFLSSQTVIDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTNFVGESEKIGGLIRSPIPQVVEVTGSESPSMYGWNSRIHRVRQDLSKARLRAIETSLENGQIWVPPSPAHRKTWEEEAQIERSLHDHFLFRKLTNSQRHVLLDCMQRVEIHPGEIVVKQGSEGDCFYVVGSGEFEVLATQRENDGEVPRVLQHYTAEKLSSFGELALMSNKPLQASVRAVTSGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSNISDSLSEVAFSNGQVIVDKSKDLHALHIIQKGEVRITFDADLVTSLNIHSLKSGNYEEDENPQSSREISLVKEEGSYFGEWALLGERIESFSAVAVGNVVCAVLTKEQFESVVGPLPKLPPDDQKITEYSSNVLKEPTKSIDISALNDVELSDLEWRTCLYANDCSEIGIVLLRNPELLLSLKRFSKHKVKKLGKEEQVLKEKNLLMSLSQSTCVPQILCTRVDQTHAGILLNTCLACPLSSILHTRLDESSARFFAASLVIALDDLHQHGVLYRGISPDVIMLDQTGHIQLVDFRFGKKICGERTFTACGMTDFLAPEIVQGKGHGFAADWWALGVLIYYMLKGEKPFGSWRESELDTFSKIAKGKLKLPQIFDPQVIDLISKLLEVDESSRLGTEGSNSVKSHPWFDGVDWDGIKECSFPVPDFILSRLTQHLDNPIPLLNQPHDPVPDWIEGW 1070
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44838133 44844383 - Bda005831.2 Bda02g00421 2716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00421 1070 Gene3D Jelly Rolls 594 749 IPR014710 -
Bda02g00421 1070 ProSiteProfiles cAMP/cGMP binding motif profile. 603 729 IPR000595 -
Bda02g00421 1070 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 37 1051 - -
Bda02g00421 1070 ProSiteProfiles PPM-type phosphatase domain profile. 94 384 IPR001932 -
Bda02g00421 1070 SUPERFAMILY PP2C-like 81 386 IPR036457 -
Bda02g00421 1070 CDD CAP_ED 603 733 IPR000595 -
Bda02g00421 1070 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Bda02g00421 1070 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Bda02g00421 1070 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Bda02g00421 1070 PRINTS cAMP-dependent protein kinase signature 723 735 - -
Bda02g00421 1070 Gene3D Jelly Rolls 452 593 IPR014710 -
Bda02g00421 1070 SMART PP2C_4 90 382 IPR001932 -
Bda02g00421 1070 ProSiteProfiles Protein kinase domain profile. 749 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00421 1070 Gene3D Transferase(Phosphotransferase) domain 1 853 1036 - -
Bda02g00421 1070 Gene3D Phosphorylase Kinase; domain 1 780 852 - -
Bda02g00421 1070 SUPERFAMILY Protein kinase-like (PK-like) 788 1054 IPR011009 -
Bda02g00421 1070 Gene3D - 89 385 IPR036457 -
Bda02g00421 1070 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 37 1051 - -
Bda02g00421 1070 SUPERFAMILY cAMP-binding domain-like 595 732 IPR018490 -
Bda02g00421 1070 CDD CAP_ED 477 586 IPR000595 -
Bda02g00421 1070 Pfam Protein kinase domain 794 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00421 1070 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Bda02g00421 1070 SMART cnmp_10 477 600 IPR000595 -
Bda02g00421 1070 SMART cnmp_10 603 745 IPR000595 -
Bda02g00421 1070 CDD PP2Cc 110 384 IPR001932 -
Bda02g00421 1070 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Bda02g00421 1070 Pfam Cyclic nucleotide-binding domain 622 727 IPR000595 -
Bda02g00421 1070 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Bda02g00421 1070 SMART serkin_6 780 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00421 1070 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Bda02g00421 1070 SUPERFAMILY cAMP-binding domain-like 457 587 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00421 Bda-Chr2:44838133 Bda09g01137 Bda-Chr9:42073545 0 dispersed
Bda02g00421 Bda-Chr2:44838133 Bda02g00427 Bda-Chr2:44902194 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69498 PF00481 PP2C 1.50E-34 CL0238 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00421 - - zju:107431937 1678.3