Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00421 | ATGGGTTGCATCTATTCAAGGGTTTGTATTGGTGAGATTTCTACGCCAAAAACTTCTAGACTTGCAGAGACTCAAAATGCAGGAATTGCTGCTGGAGTTGGAGTCTTCTCTCCTGCCTCTTCCAACGGCCAAGATGGAGAAGTGGTGGATCAGTTGAATCGGTTTAACACCAACAGAGATTCGGAGGCCGGTATTAGAAGACTCTCAAGGGTTTCATCGCAGTTTTTACCACCGGAAGGATCAAGAACTGTAAAAGTTCCACTTGGCAACTACGAACTACGCTATTCGTTTCTGTCGCAGAGAGGCTATTATCCGGATGCTCTTGATAAGGCCAACCAAGACAGCTTTTGTATCCACACTCCATTTGGAACTAGCCCAGACGACCATTTCTTCGGGGTTTTCGATGGTCATGGAGAATTTGGAGCTCAATGCTCTCAGTACGTTAAGAGAAAAGTATGTGAAAATTTGCTCAGAAACACTAAATTCCAAAAAGACGCTGTTGAGGCTTGCCATGCGGCTTTTCTGGCAACAAATTCACAGCTTCACGCCGATATTTTAGACGACAGCATGAGTGGGACTACTGCTGTGACAATTCTGGTTCGAGGTAGAACCATCTATGTATCTAATTCAGGTGATTCGAGGGCGGTTCTTGCAGAGAAAAGAGGGAAGGATCTTGTAGCTGTCGACCTTTCAATCGATCACACTCCATTTAGGACAGATGAGCTAGAACGAGTTAAGCTTTGCGGGGCCAGAGTTCTCACATTGGATCAAATCGAGGGTCTAAAAGATCCAGATGTGCAATGTTGGGGAGCGGAAGAAGGCGATGAAGGTGATCCTCCGAGGCTCTGGGTCCCAAATGGGATGTTTCCTGGGACGGCTTTTACGAGAAGTATAGGTGATTCACTTGCTGAGACAATTGGGGTTGTTGCTACTCCTGAAATTGTTGTTTTTGAGCTTACATCAAATAATCCTTTCTTCGTACTGGCTAGTGATGGGGTGTTCGAGTTTCTTTCGAGTCAAACAGTTATCGACATGGTTGCAAAGTACAAAGATCCTCGTGATGCTTGTGCTGCGATCGTAGCCGAGTCTTATAGACTTTGGCTACAGTACGAAACTCGGACAGATGATATTACAGTGATCGTTGTGCATATCAATGGCCTAACTAATTTTGTTGGTGAATCAGAAAAAATTGGTGGTTTGATACGCTCACCAATCCCTCAAGTAGTTGAGGTTACAGGTTCAGAATCTCCCTCAATGTATGGTTGGAATTCGAGGATCCATCGTGTGAGGCAAGATTTGTCAAAGGCTCGCCTTCGTGCTATTGAAACTTCTCTAGAGAATGGTCAGATATGGGTTCCTCCATCTCCGGCCCATAGGAAGACATGGGAAGAAGAAGCGCAAATTGAGCGGTCACTGCATGACCATTTCCTTTTCCGAAAATTAACCAATTCTCAGCGGCACGTTTTACTAGATTGCATGCAAAGAGTAGAGATCCATCCTGGAGAAATTGTAGTTAAACAGGGTAGTGAAGGTGATTGTTTTTACGTTGTTGGAAGTGGAGAATTTGAGGTCTTGGCAACCCAGCGAGAGAATGATGGAGAGGTTCCTCGAGTTCTGCAGCACTACACAGCTGAGAAGTTATCGTCTTTTGGAGAACTAGCACTAATGTCTAACAAACCACTCCAAGCCTCTGTTCGAGCTGTAACAAGTGGAACATTATGGGCTTTGAAAAGAGAAGATTTTCGTGGAATTCTCATGTCAGAGTTTACTAATTTGTCATCGTTGAAGCTCCTTCGATCAGTTGATCTTTTATCAAGGTTGACAATCTTGCAGCTGAGTAACATTTCTGATAGTCTTTCTGAAGTTGCCTTTTCAAATGGGCAGGTGATAGTTGATAAGAGCAAAGACCTACATGCATTGCACATCATCCAAAAGGGAGAAGTTAGGATTACTTTTGATGCTGACTTAGTGACCAGTCTGAACATTCACAGCCTAAAATCCGGCAATTATGAAGAAGATGAAAACCCACAAAGCAGCAGAGAAATCTCGTTGGTCAAGGAAGAAGGAAGTTATTTTGGTGAATGGGCTCTTCTCGGTGAGCGTATTGAATCCTTTAGTGCTGTCGCTGTAGGTAATGTTGTGTGTGCTGTCTTAACAAAGGAACAATTCGAGTCTGTCGTTGGCCCTTTACCAAAGCTTCCTCCAGATGATCAGAAGATAACAGAATATTCTTCAAACGTTCTCAAGGAACCTACAAAAAGTATTGATATTTCAGCTCTCAATGATGTTGAGCTCTCTGATCTGGAGTGGAGAACGTGCTTATACGCCAACGATTGCAGTGAGATTGGTATCGTATTGTTAAGAAATCCAGAGCTTCTGCTCAGTCTGAAGAGATTTTCAAAGCATAAAGTAAAAAAGCTTGGGAAGGAAGAACAAGTGTTAAAGGAGAAGAATCTTTTGATGAGTTTGAGCCAATCAACTTGCGTTCCGCAGATCCTTTGCACTCGTGTAGATCAAACACATGCTGGGATATTGCTGAATACATGCCTTGCTTGTCCTTTGTCTTCTATACTTCACACCCGGTTAGATGAGTCTTCTGCTCGATTTTTTGCTGCTTCTCTTGTCATTGCCTTAGATGATTTGCACCAGCATGGTGTACTCTACAGAGGAATATCTCCTGATGTTATAATGCTTGACCAAACAGGACATATACAGCTAGTGGACTTCAGATTTGGAAAGAAGATATGTGGTGAGAGGACATTCACTGCTTGTGGAATGACAGACTTCTTAGCTCCAGAGATAGTCCAAGGAAAAGGCCATGGTTTTGCTGCTGACTGGTGGGCACTCGGAGTCTTGATCTATTACATGCTAAAAGGCGAAAAGCCATTTGGATCATGGAGAGAGAGCGAACTCGATACATTTTCCAAAATCGCGAAAGGAAAATTAAAGCTTCCTCAGATTTTCGACCCCCAAGTCATTGATCTCATATCCAAGTTGCTTGAAGTTGACGAAAGCTCGAGGCTTGGAACTGAAGGTTCAAATTCAGTCAAAAGTCATCCATGGTTTGACGGTGTAGATTGGGACGGGATTAAAGAATGTAGCTTTCCTGTTCCTGATTTTATCCTCTCCCGTCTAACTCAACACCTCGACAATCCCATTCCCTTACTTAACCAACCTCACGACCCAGTTCCTGATTGGATCGAAGGGTGGTAG | 3213 | 43.51 | MGCIYSRVCIGEISTPKTSRLAETQNAGIAAGVGVFSPASSNGQDGEVVDQLNRFNTNRDSEAGIRRLSRVSSQFLPPEGSRTVKVPLGNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQYVKRKVCENLLRNTKFQKDAVEACHAAFLATNSQLHADILDDSMSGTTAVTILVRGRTIYVSNSGDSRAVLAEKRGKDLVAVDLSIDHTPFRTDELERVKLCGARVLTLDQIEGLKDPDVQCWGAEEGDEGDPPRLWVPNGMFPGTAFTRSIGDSLAETIGVVATPEIVVFELTSNNPFFVLASDGVFEFLSSQTVIDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTNFVGESEKIGGLIRSPIPQVVEVTGSESPSMYGWNSRIHRVRQDLSKARLRAIETSLENGQIWVPPSPAHRKTWEEEAQIERSLHDHFLFRKLTNSQRHVLLDCMQRVEIHPGEIVVKQGSEGDCFYVVGSGEFEVLATQRENDGEVPRVLQHYTAEKLSSFGELALMSNKPLQASVRAVTSGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSNISDSLSEVAFSNGQVIVDKSKDLHALHIIQKGEVRITFDADLVTSLNIHSLKSGNYEEDENPQSSREISLVKEEGSYFGEWALLGERIESFSAVAVGNVVCAVLTKEQFESVVGPLPKLPPDDQKITEYSSNVLKEPTKSIDISALNDVELSDLEWRTCLYANDCSEIGIVLLRNPELLLSLKRFSKHKVKKLGKEEQVLKEKNLLMSLSQSTCVPQILCTRVDQTHAGILLNTCLACPLSSILHTRLDESSARFFAASLVIALDDLHQHGVLYRGISPDVIMLDQTGHIQLVDFRFGKKICGERTFTACGMTDFLAPEIVQGKGHGFAADWWALGVLIYYMLKGEKPFGSWRESELDTFSKIAKGKLKLPQIFDPQVIDLISKLLEVDESSRLGTEGSNSVKSHPWFDGVDWDGIKECSFPVPDFILSRLTQHLDNPIPLLNQPHDPVPDWIEGW | 1070 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 44838133 | 44844383 | - | Bda005831.2 | Bda02g00421 | 2716 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00421 | 1070 | Gene3D | Jelly Rolls | 594 | 749 | IPR014710 | - | |
Bda02g00421 | 1070 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 603 | 729 | IPR000595 | - | |
Bda02g00421 | 1070 | PANTHER | PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN | 37 | 1051 | - | - | |
Bda02g00421 | 1070 | ProSiteProfiles | PPM-type phosphatase domain profile. | 94 | 384 | IPR001932 | - | |
Bda02g00421 | 1070 | SUPERFAMILY | PP2C-like | 81 | 386 | IPR036457 | - | |
Bda02g00421 | 1070 | CDD | CAP_ED | 603 | 733 | IPR000595 | - | |
Bda02g00421 | 1070 | PRINTS | cAMP-dependent protein kinase signature | 548 | 557 | - | - | |
Bda02g00421 | 1070 | PRINTS | cAMP-dependent protein kinase signature | 513 | 527 | - | - | |
Bda02g00421 | 1070 | PRINTS | cAMP-dependent protein kinase signature | 498 | 512 | - | - | |
Bda02g00421 | 1070 | PRINTS | cAMP-dependent protein kinase signature | 723 | 735 | - | - | |
Bda02g00421 | 1070 | Gene3D | Jelly Rolls | 452 | 593 | IPR014710 | - | |
Bda02g00421 | 1070 | SMART | PP2C_4 | 90 | 382 | IPR001932 | - | |
Bda02g00421 | 1070 | ProSiteProfiles | Protein kinase domain profile. | 749 | 1022 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00421 | 1070 | Gene3D | Transferase(Phosphotransferase) domain 1 | 853 | 1036 | - | - | |
Bda02g00421 | 1070 | Gene3D | Phosphorylase Kinase; domain 1 | 780 | 852 | - | - | |
Bda02g00421 | 1070 | SUPERFAMILY | Protein kinase-like (PK-like) | 788 | 1054 | IPR011009 | - | |
Bda02g00421 | 1070 | Gene3D | - | 89 | 385 | IPR036457 | - | |
Bda02g00421 | 1070 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 37 | 1051 | - | - | |
Bda02g00421 | 1070 | SUPERFAMILY | cAMP-binding domain-like | 595 | 732 | IPR018490 | - | |
Bda02g00421 | 1070 | CDD | CAP_ED | 477 | 586 | IPR000595 | - | |
Bda02g00421 | 1070 | Pfam | Protein kinase domain | 794 | 1022 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00421 | 1070 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169 | |
Bda02g00421 | 1070 | SMART | cnmp_10 | 477 | 600 | IPR000595 | - | |
Bda02g00421 | 1070 | SMART | cnmp_10 | 603 | 745 | IPR000595 | - | |
Bda02g00421 | 1070 | CDD | PP2Cc | 110 | 384 | IPR001932 | - | |
Bda02g00421 | 1070 | Pfam | Cyclic nucleotide-binding domain | 496 | 587 | IPR000595 | - | |
Bda02g00421 | 1070 | Pfam | Cyclic nucleotide-binding domain | 622 | 727 | IPR000595 | - | |
Bda02g00421 | 1070 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 477 | 586 | IPR000595 | - | |
Bda02g00421 | 1070 | SMART | serkin_6 | 780 | 1022 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00421 | 1070 | Pfam | Protein phosphatase 2C | 123 | 362 | IPR001932 | - | |
Bda02g00421 | 1070 | SUPERFAMILY | cAMP-binding domain-like | 457 | 587 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00421 | Bda-Chr2:44838133 | Bda09g01137 | Bda-Chr9:42073545 | 0 | dispersed | |
Bda02g00421 | Bda-Chr2:44838133 | Bda02g00427 | Bda-Chr2:44902194 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69498 | PF00481 | PP2C | 1.50E-34 | CL0238 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00421 | - | - | zju:107431937 | 1678.3 |