Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00427 ATGTATGGTTGGAATTCGAGGATCCATCGTGTGAGGCAAGATTTGTCAAAGGCTCGCCTTCGTGCTATTGAAACTTCTCTAGAGAATGGTCAGATATGGGTTCCTCCATCTCCGGCCCATAGGAAGACATGGGAAGAAGAAGCGCAAATTGAGCGGTCACTGCACGACCATTTCCTTTTCCGAAAATTAACCAATTCTCAGCGGCACGTTTTACTAGATTGCATGCAAAGAGTAGAGATCCATCCTGGAGAAATTGTAGTTAAACAGGGTAGTGAAGGTGATTGTTTTTACGTTGTTGGAAGTGGAGAATTTGAGGTCTTGGCAACCCAGCGAGAGAATGATGGAGAGGTTCCTCGAGTTCTGCAGCACTACACAGCTGAGAAGTTATCGTCTTTTGGAGAACTAGCACTAATGTCTAACAAACCACTCCAAGCCTCTGTTCGAGCTGTAACAAGTGGAACATTATGGGCTTTGAAAAGAGAAGATTTTCGTGGAATTCTCATGTCAGAGTTTACTAATTTGTCATCGTTGAAGCTCCTTCGATCAGTTGATCTTTTATCAAGGTTGACAATCTTGCAGCTGAGTAACATTTCTGATAGTCTTTCTGAAGTTGCCTTTTCAAATGGGCAGGTGATAGTTGATAAGAGCAAAGACCTACTTGCATTGCACATCATCCAAAAGGGAGAAGTTAGGATTACTTTTGATGCTGACTTAGTGACCAGTCTGAACATTCACAGCCTAAAATCCGGCAATTATGAAGAAGATGAAAACCCACAAAGCAGTAGAGAAATCTCGTTGGTCAAGGAAGAAGGAAGTTATTTTTTTGTGAATGGGCTCTTCTCGGTGAGCGTATTGAATCCTTTAGTGCTGTCGCTGTAG 879 42.55 MYGWNSRIHRVRQDLSKARLRAIETSLENGQIWVPPSPAHRKTWEEEAQIERSLHDHFLFRKLTNSQRHVLLDCMQRVEIHPGEIVVKQGSEGDCFYVVGSGEFEVLATQRENDGEVPRVLQHYTAEKLSSFGELALMSNKPLQASVRAVTSGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSNISDSLSEVAFSNGQVIVDKSKDLLALHIIQKGEVRITFDADLVTSLNIHSLKSGNYEEDENPQSSREISLVKEEGSYFFVNGLFSVSVLNPLVLSL 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44902194 44903955 - Bda005838.1 Bda02g00427 2722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00427 292 PRINTS cAMP-dependent protein kinase signature 142 153 - -
Bda02g00427 292 PRINTS cAMP-dependent protein kinase signature 80 94 - -
Bda02g00427 292 PRINTS cAMP-dependent protein kinase signature 95 109 - -
Bda02g00427 292 PRINTS cAMP-dependent protein kinase signature 130 139 - -
Bda02g00427 292 Gene3D Jelly Rolls 173 283 IPR014710 -
Bda02g00427 292 ProSiteProfiles cAMP/cGMP binding motif profile. 185 252 IPR000595 -
Bda02g00427 292 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 2 241 - -
Bda02g00427 292 ProSiteProfiles cAMP/cGMP binding motif profile. 59 168 IPR000595 -
Bda02g00427 292 Pfam Cyclic nucleotide-binding domain 78 169 IPR000595 -
Bda02g00427 292 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 2 241 - -
Bda02g00427 292 SUPERFAMILY cAMP-binding domain-like 176 250 IPR018490 -
Bda02g00427 292 SMART cnmp_10 59 182 IPR000595 -
Bda02g00427 292 CDD CAP_ED 59 168 IPR000595 -
Bda02g00427 292 SUPERFAMILY cAMP-binding domain-like 39 169 IPR018490 -
Bda02g00427 292 Gene3D Jelly Rolls 34 172 IPR014710 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00427 Bda09g01137 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00421 Bda-Chr2:44838133 Bda02g00427 Bda-Chr2:44902194 0 proximal
Bda02g00427 Bda-Chr2:44902194 Bda09g01137 Bda-Chr9:42073545 1.23E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00427 - - zju:107431937 436.032