Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00443 | ATGGCCAAACCATCTCCTCCTCCGGCAGTGAATGCTTATACGCCACCCTTTTTACAGCCTTACATCAGTAGTAGTGGAGGTTCTGGCTCTAATTATTCCGGGCCTGAAACACCGCTCCCTCCTCCACCGCCCGGCTCTGTATTAGGATTCTCTAAGAGCACTTTTACTTATGAGGAATTAGCATTGGCCACAGATGGTTTTTCAGAAGCTAACCTCCTCGGACAAGGTGGTTTTGGGTATGTGCACAGAGGAGTTCTTCCTAATGGGAAAGAAGTGGCAGTCAAGCAGCTTAAAGCTGGAAGCGGCCAAGGGGAGCGTGAATTTCAAGCAGAAGTTGAAATTATTAGCCGAGTGCACCATAGACATCTCGTTTCACTCGTTGGATATTGCATCACTGGGTCTCAGAGATTGCTGGTTTATGATTATATTCCCAACAATACATTGGAGTTCCACTTACACGGAAAAGGACGACCTACCATGGATTGGCCATCGAGAATGAGAATCGCCTTAGGATCTGCAAAAGGGCTGGCATACCTTCATGAGGATTGTAAGAATTCACTATTAACTCCCTCACGATGTTGTTTAATTTTTATACACAGTTGTATTTATAGTTGTTTACTTCTTCTATATGCAGGCAATCCTAAAATTATCCATCGTGACATAAAAGCGGCCAATATTCTACTAGATTTTAAGTTTGAGGCGAAGGTGGCTGATTTTGGACTTGCAAAGTTTACTTCTGACATTAATACGCATGTATCTACCCGAGTGATGGGAACTTTTGGATATCTTGCTCCAGAATATGCTTCGAGTGGCAAACTATCTGAAAAATCTGATGTTTTCTCCTTCGGAGTCATGCTTTTGGAGTTGATTACAGGGCATAGACCTGTGGATACTACTCAGACTTTCATGGAGGATAGTTTAGTAGAGTGGGCTAGACCTTTACTTATCCGAGCTGTTGAAGATGATAACTTTGATGGTCTGATAGACCCAAAGCTGCAAGGTAATTTCAGCCCCACAGAGATGGCTCGAATGGTTGCTTGTGCGGCTGCTTGTGTGCGTCATTCCGCAAAACGTCGACCAAGGATGAGTCAGCAGGTGGTTCGAGCTCTAGAAGGGGACGCAACTATAGCCGATCTCAACGAAGGAGTGAGACCAGGACATAGCACTGTATATGGGGAAAGCTCTGACTATGACTCGAGCCAATACAAGGAGGACATGAAGAAGTTCAGGAAAATGGCACTGGGAAGCCAGGAGTACGGTGCCAGCGGCGAGTACAGCGGCGGAACCAGCGAGTACGGTCTGTACCCATCCGGGTCGAGCAGTGAGGGGCAAACAACTAGAGAAATGGAGTTGAGAAGGTTAAGGAATGGAAGTCAAGGATTTAGCTGA | 1389 | 45.79 | MAKPSPPPAVNAYTPPFLQPYISSSGGSGSNYSGPETPLPPPPPGSVLGFSKSTFTYEELALATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYDYIPNNTLEFHLHGKGRPTMDWPSRMRIALGSAKGLAYLHEDCKNSLLTPSRCCLIFIHSCIYSCLLLLYAGNPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDINTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGHRPVDTTQTFMEDSLVEWARPLLIRAVEDDNFDGLIDPKLQGNFSPTEMARMVACAAACVRHSAKRRPRMSQQVVRALEGDATIADLNEGVRPGHSTVYGESSDYDSSQYKEDMKKFRKMALGSQEYGASGEYSGGTSEYGLYPSGSSSEGQTTREMELRRLRNGSQGFS | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 45072971 | 45075421 | - | Bda005855.1 | Bda02g00443 | 2738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00443 | 462 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Bda02g00443 | 462 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 213 | 451 | - | - | |
Bda02g00443 | 462 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 3 | 186 | - | - | |
Bda02g00443 | 462 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 213 | 451 | - | - | |
Bda02g00443 | 462 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 3 | 186 | - | - | |
Bda02g00443 | 462 | Pfam | Protein tyrosine and serine/threonine kinase | 71 | 181 | IPR001245 | GO:0004672|GO:0006468 | |
Bda02g00443 | 462 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 381 | - | - | |
Bda02g00443 | 462 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672|GO:0006468 | |
Bda02g00443 | 462 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 95 | IPR017441 | GO:0005524 | |
Bda02g00443 | 462 | Pfam | Protein kinase domain | 201 | 301 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00443 | 462 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - | |
Bda02g00443 | 462 | SMART | serkin_6 | 67 | 357 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00443 | 462 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 364 | IPR011009 | - | |
Bda02g00443 | 462 | MobiDBLite | consensus disorder prediction | 419 | 462 | - | - | |
Bda02g00443 | 462 | ProSiteProfiles | Protein kinase domain profile. | 67 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00443 | 462 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 142 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00443 | Bda-Chr2:45072971 | Bda11g01113 | Bda-Chr11:11007129 | 0 | dispersed | |
Bda01g02061 | Bda-Chr1:56840481 | Bda02g00443 | Bda-Chr2:45072971 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69500 | PF00069 | Pkinase | 6.70E-23 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00443 | - | - | jre:108980419 | 676.781 |