Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00443 ATGGCCAAACCATCTCCTCCTCCGGCAGTGAATGCTTATACGCCACCCTTTTTACAGCCTTACATCAGTAGTAGTGGAGGTTCTGGCTCTAATTATTCCGGGCCTGAAACACCGCTCCCTCCTCCACCGCCCGGCTCTGTATTAGGATTCTCTAAGAGCACTTTTACTTATGAGGAATTAGCATTGGCCACAGATGGTTTTTCAGAAGCTAACCTCCTCGGACAAGGTGGTTTTGGGTATGTGCACAGAGGAGTTCTTCCTAATGGGAAAGAAGTGGCAGTCAAGCAGCTTAAAGCTGGAAGCGGCCAAGGGGAGCGTGAATTTCAAGCAGAAGTTGAAATTATTAGCCGAGTGCACCATAGACATCTCGTTTCACTCGTTGGATATTGCATCACTGGGTCTCAGAGATTGCTGGTTTATGATTATATTCCCAACAATACATTGGAGTTCCACTTACACGGAAAAGGACGACCTACCATGGATTGGCCATCGAGAATGAGAATCGCCTTAGGATCTGCAAAAGGGCTGGCATACCTTCATGAGGATTGTAAGAATTCACTATTAACTCCCTCACGATGTTGTTTAATTTTTATACACAGTTGTATTTATAGTTGTTTACTTCTTCTATATGCAGGCAATCCTAAAATTATCCATCGTGACATAAAAGCGGCCAATATTCTACTAGATTTTAAGTTTGAGGCGAAGGTGGCTGATTTTGGACTTGCAAAGTTTACTTCTGACATTAATACGCATGTATCTACCCGAGTGATGGGAACTTTTGGATATCTTGCTCCAGAATATGCTTCGAGTGGCAAACTATCTGAAAAATCTGATGTTTTCTCCTTCGGAGTCATGCTTTTGGAGTTGATTACAGGGCATAGACCTGTGGATACTACTCAGACTTTCATGGAGGATAGTTTAGTAGAGTGGGCTAGACCTTTACTTATCCGAGCTGTTGAAGATGATAACTTTGATGGTCTGATAGACCCAAAGCTGCAAGGTAATTTCAGCCCCACAGAGATGGCTCGAATGGTTGCTTGTGCGGCTGCTTGTGTGCGTCATTCCGCAAAACGTCGACCAAGGATGAGTCAGCAGGTGGTTCGAGCTCTAGAAGGGGACGCAACTATAGCCGATCTCAACGAAGGAGTGAGACCAGGACATAGCACTGTATATGGGGAAAGCTCTGACTATGACTCGAGCCAATACAAGGAGGACATGAAGAAGTTCAGGAAAATGGCACTGGGAAGCCAGGAGTACGGTGCCAGCGGCGAGTACAGCGGCGGAACCAGCGAGTACGGTCTGTACCCATCCGGGTCGAGCAGTGAGGGGCAAACAACTAGAGAAATGGAGTTGAGAAGGTTAAGGAATGGAAGTCAAGGATTTAGCTGA 1389 45.79 MAKPSPPPAVNAYTPPFLQPYISSSGGSGSNYSGPETPLPPPPPGSVLGFSKSTFTYEELALATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYDYIPNNTLEFHLHGKGRPTMDWPSRMRIALGSAKGLAYLHEDCKNSLLTPSRCCLIFIHSCIYSCLLLLYAGNPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDINTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGHRPVDTTQTFMEDSLVEWARPLLIRAVEDDNFDGLIDPKLQGNFSPTEMARMVACAAACVRHSAKRRPRMSQQVVRALEGDATIADLNEGVRPGHSTVYGESSDYDSSQYKEDMKKFRKMALGSQEYGASGEYSGGTSEYGLYPSGSSSEGQTTREMELRRLRNGSQGFS 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45072971 45075421 - Bda005855.1 Bda02g00443 2738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00443 462 MobiDBLite consensus disorder prediction 1 47 - -
Bda02g00443 462 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 213 451 - -
Bda02g00443 462 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 186 - -
Bda02g00443 462 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 213 451 - -
Bda02g00443 462 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 3 186 - -
Bda02g00443 462 Pfam Protein tyrosine and serine/threonine kinase 71 181 IPR001245 GO:0004672|GO:0006468
Bda02g00443 462 Gene3D Transferase(Phosphotransferase) domain 1 143 381 - -
Bda02g00443 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bda02g00443 462 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Bda02g00443 462 Pfam Protein kinase domain 201 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00443 462 MobiDBLite consensus disorder prediction 17 34 - -
Bda02g00443 462 SMART serkin_6 67 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00443 462 SUPERFAMILY Protein kinase-like (PK-like) 42 364 IPR011009 -
Bda02g00443 462 MobiDBLite consensus disorder prediction 419 462 - -
Bda02g00443 462 ProSiteProfiles Protein kinase domain profile. 67 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00443 462 Gene3D Phosphorylase Kinase; domain 1 45 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00443 Bda-Chr2:45072971 Bda11g01113 Bda-Chr11:11007129 0 dispersed
Bda01g02061 Bda-Chr1:56840481 Bda02g00443 Bda-Chr2:45072971 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69500 PF00069 Pkinase 6.70E-23 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00443 - - jre:108980419 676.781