Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00472 ATGAGTCGTGTCGTTCCTAAAGATACATTTAACAAGCAGATGGATTCGAGCAAGTATGTGAGATATACACCTGAACAGGTTGAAGCTTTAGAGAGGGTTTACTCTGAGTGTCCAAAGCCTAGCTCTTTAAGGAGGCAACAGCTCATTAGGGAGTGCCCTATTCTCTCTAATATTGAGCCTAAACAGATCAAAGTCTGGTTCCAGAACCGCAGATGCCGTGAGAAGCAGAGAAAAGAATCTGCTCGCCTACAAACTGTGAATAGAAAACTGAGTGCAATGAACAAGCTGTTAATGGAAGAGAATGACCGTCTGCAGAAACAAGTATCTCAGCTGGTTTATGATAATGGGTATATGCGTCAGCAGCTGCATAGTGCGTCTGGAGCGACCACAGACAATAGCTGTGAGTCTGTGGTCATGAGTGGTCAGCACCAACAACAGCAAAACCCAACTTCTCAGCATCCTGAAAGGGATGCTACGAACCCAGCTGGTCTTCTTGCAATTGCTGAGGAGACCTTGGCAGAGTTTCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAAATGATTGGGATGAAGCCTGGTCCGGATTCGATTGGAATTGTTGCTGTTTCTCGCAACTGCAGCGGAGTGGCAGCACGAGCTTGTGGTCTCGTTAGTCTCGAGCCCACCAAAATTGCTGAAATCTTGAAAGACCGTCCTACGTGGTTTCGGGACTGCCGTCGTGTTGATATATTAAGCGTAATACCTGCTGGAAATGGGGGGATGATAGAGCTCATATATATGCAGACATATGCTCCTACGACATTGGCTGCAGCACGGGATTTCTGGACTCTACGATACACTACTAGTCTAGACGATGGAAGCCTTGTGGTATGTGAGAGATCGTTGACTGCCTCGACTGGTGGTCCCCCGGGGCCTCCTACTTCGTGTTTTGCAAGAACTGAAATGCTTCCTAGTGGATGTTTAATCCGTGCTTGCGAGGGTGGAGGGTCCATTATTCACATTGTTGATCATATCGATTTCGATGCTCGGAGCGTACCTGAAGTCCTGAGACCTCTGTATGAATCATCTAAGATTCTTGCTCAGAAAATGACAATTGCTGCTGTACGGCATGTTAGACAAATTGCTCAAGAGTCTAATGGAGAAATTCAAATCGGCAGTGGCCGCCAACCTGCTGTTTTAAGGACATTTAGTCAGAAATTGTGCCGGGGATTCAACGATGCTGTTAATGGATTTATTGACGATGGCTGGTCCCTCATGGGCAGCGATGGAGTGGAGGATGTGACGATTATGATAAACTCGTCGCCAAATAAAATTTTCAACTCCCAATTCGGTGGCATGTCCATGTGTCCAAGTTTTGGCAGCGGTGTGTTATGTGCCAAGGCGTCGATGCTGTTGCAGGATGTTCCCCCCGCTTTGCTCATCCGATTCTTGAGAGAGCATCGTTCTGAGTGGGCCGATTATGGGGTTGATGCCTACTCGGCCACGTGTCTTAAATCCAGCCCTTACTCGACTCCCTGCCCCAGGCCTAGTAGCTTCCCTAGTGGCCAAGTTATTCTTCCTCTTGCTCATACTGTGGAACACGAAGAGTTCTTGGAGGTTGTTCGGCTCGAGGGCCATGCGTTCACTCCTGATGATGTAGTTTTGGCCGGACGGGATATGTACTTATTGCAGCTATGTAGTGGGGTTGACGAGAGTGCCGTTGGCTCCTGTGCGCAGCTTGTTTTTGCACCGATTGACGAATCATTTGCAGATGATGCTCCCCTGCTGCCTTCTGGGTTTCGTGACTGTTCTGGAACGGCCACTCGAACTTTGGATTTGGCTTCTACCCTTGAAGTTAGGCCTGGCAGTGCTCGACTGGGCAGTGACGCTGATTTGAACGGCTATAACCTTCGATCCGTATTAACAATTGCATTCCAGTTTACTTTTGAGAATCACATGAGAGAAAATGTGGCTGCGATGGCTCGTCAATATGTTCGGAGTGTGGTTGGCTCCGTGCAAAGGGTTGCTATGGCGATTGCCCCTTCGCGTATGAGCTCCCTCGTGGGTCCTAAACCCCTTGCTGCTTCTCCCGAAGCTGTTACTTTGGCGCGATGGATTTGCCGAAGTTACAGGATTCATGTAGGGGGAGATCTCCTTCAAGCCGAATCACAATCCGGCGATGTTATTTTGAGGCAACTGTGGCACCATTCTGATGCAATTATGTGCTGCTCGGTGGCATCTCCCATCTTCACCTTTGCAAACCAAGCAGGTCTTGACATGCTTGAAACTACGCTCGTGGCCCTCCAAGATATTATGCTCGACAAGATTCTCGACGACGGAGGCAGAAAAATTCTCTGCTCCGAATTCTCCAAGATTATGCAGCAGGGATTTGCTCACCTGCCGTCCAGAATTTGCACATCGAGCATGGGCAGACCCGTAACTTACGAGCAGGCCGTTGCTTGGAAAGTCCTCGACGACGGCGACTCGAATCACTGCCTGGCGATTATGTTCATCAACTGGTCTTTTGTATGA 2517 48.87 MSRVVPKDTFNKQMDSSKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYDNGYMRQQLHSASGATTDNSCESVVMSGQHQQQQNPTSQHPERDATNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKIAEILKDRPTWFRDCRRVDILSVIPAGNGGMIELIYMQTYAPTTLAAARDFWTLRYTTSLDDGSLVVCERSLTASTGGPPGPPTSCFARTEMLPSGCLIRACEGGGSIIHIVDHIDFDARSVPEVLRPLYESSKILAQKMTIAAVRHVRQIAQESNGEIQIGSGRQPAVLRTFSQKLCRGFNDAVNGFIDDGWSLMGSDGVEDVTIMINSSPNKIFNSQFGGMSMCPSFGSGVLCAKASMLLQDVPPALLIRFLREHRSEWADYGVDAYSATCLKSSPYSTPCPRPSSFPSGQVILPLAHTVEHEEFLEVVRLEGHAFTPDDVVLAGRDMYLLQLCSGVDESAVGSCAQLVFAPIDESFADDAPLLPSGFRDCSGTATRTLDLASTLEVRPGSARLGSDADLNGYNLRSVLTIAFQFTFENHMRENVAAMARQYVRSVVGSVQRVAMAIAPSRMSSLVGPKPLAASPEAVTLARWICRSYRIHVGGDLLQAESQSGDVILRQLWHHSDAIMCCSVASPIFTFANQAGLDMLETTLVALQDIMLDKILDDGGRKILCSEFSKIMQQGFAHLPSRICTSSMGRPVTYEQAVAWKVLDDGDSNHCLAIMFINWSFV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45621679 45626986 - Bda005889.1 Bda02g00472 2767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00472 838 CDD homeodomain 18 78 IPR001356 GO:0003677
Bda02g00472 838 MobiDBLite consensus disorder prediction 123 158 - -
Bda02g00472 838 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Bda02g00472 838 SUPERFAMILY Bet v1-like 167 378 - -
Bda02g00472 838 Coils Coil 83 107 - -
Bda02g00472 838 Pfam MEKHLA domain 696 837 IPR013978 -
Bda02g00472 838 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Bda02g00472 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 838 IPR044830 GO:0003700
Bda02g00472 838 Gene3D - 200 382 IPR023393 -
Bda02g00472 838 CDD bZIP 70 109 - -
Bda02g00472 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 838 - -
Bda02g00472 838 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Bda02g00472 838 SMART START_1 166 376 IPR002913 GO:0008289
Bda02g00472 838 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Bda02g00472 838 SMART HOX_1 15 81 IPR001356 GO:0003677
Bda02g00472 838 MobiDBLite consensus disorder prediction 123 157 - -
Bda02g00472 838 Gene3D - 11 84 - -
Bda02g00472 838 SUPERFAMILY Bet v1-like 414 582 - -
Bda02g00472 838 Pfam START domain 167 375 IPR002913 GO:0008289
Bda02g00472 838 CDD START_ArGLABRA2_like 161 377 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00472 Bda09g01188 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00472 Bda-Chr2:45621679 Bda10g00831 Bda-Chr10:42695627 0 dispersed
Bda07g00634 Bda-Chr7:7665365 Bda02g00472 Bda-Chr2:45621679 0 transposed
Bda02g00472 Bda-Chr2:45621679 Bda09g01188 Bda-Chr9:42819141 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15549 PF01852 START 4.50E-47 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00472 K09338 - qsu:112031480 1415.59